SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene44091

Length: 523 nt

UniGene Fasta

>sp_v1.1_unigene44091
GCCAATTAGTGAATTGTGCTGGACTTGACTACCTTAATCTTTCTCACAATTCATTGGAAGGCACCATTCCGACATCAATCGATCAAGTTAAAGGACTTCAAGATTTGGATCTCTCTTTCAATAAGCTTTCCGGTCCCCTGCCTACCTCTATAGAGAAATTACAGAAGCTTACGCACTTAAACTTGTCATACAATAACTTCACAGGAGAAGTACCATCCTCTGGAGCTTTCAGAAAACTGAATTTGACATCTTTCTTAGGAAACACTGGACTCTGTGGCAGATGGATAGAGTTACCTCATTGTAAATTGACGACAAGGCACCATCATGATTCCAAAAGAAGCGTAGTTATCTTGGCCACTTCGGTTGGTTTAACTTTGCTATTGGTATTTTGCCTAGCCTTCATGGTTTTGATATATTTTCGTAGCAGAAAGCCTGCATTGTTGGAAACTATTTCAGCGAGATTAGGGAGGATGCTGAGGAGCCAACTCCGCGAGACGAAGATTGTAAGTGAGGAAGAGGTGAA

Ace file of the UniGene sp_v1.1_unigene44091

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9RGN4_RICCO	-	-	2.0e-23	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	36%
Blast2go	protein	-	-	2.46436e-24	57%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Leucine-rich repeat	IPR001611	-	2.46436e-24	57%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLV1

Fln msg: Distance to subject end: 330 aas, your sequence is shorter than subject: 173 - 607

Fln protein: QLVNCAGLDYLNLSHNSLEGTIPTSIDQVKGLQDLDLSFNKLSGPLPTSIEKLQKLTHLNLSYNNFTGEVPSSGAFRKLNLTSFLGNTGLCGRWIELPHCKLTTRHHHDSKRSVVILATSVGLTLLLVFCLAFMVLIYFRSRKPALLETISARLGRMLRSQLRETKIVSEEEV

Protein Length: 174

Fln nts: GCCAATTAGTGAATTGTGCTGGACTTGACTACCTTAATCTTTCTCACAATTCATTGGAAGGCACCATTCCGACATCAATCGATCAAGTTAAAGGACTTCAAGATTTGGATCTCTCTTTCAATAAGCTTTCCGGTCCCCTGCCTACCTCTATAGAGAAATTACAGAAGCTTACGCACTTAAACTTGTCATACAATAACTTCACAGGAGAAGTACCATCCTCTGGAGCTTTCAGAAAACTGAATTTGACATCTTTCTTAGGAAACACTGGACTCTGTGGCAGATGGATAGAGTTACCTCATTGTAAATTGACGACAAGGCACCATCATGATTCCAAAAGAAGCGTAGTTATCTTGGCCACTTCGGTTGGTTTAACTTTGCTATTGGTATTTTGCCTAGCCTTCATGGTTTTGATATATTTTCGTAGCAGAAAGCCTGCATTGTTGGAAACTATTTCAGCGAGATTAGGGAGGATGCTGAGGAGCCAACTCCGCGAGACGAAGATTGTAAGTGAGGAAGAGGTGAA

Fln Alignment:

sp_v1.1_unigene44091___QLVNCAGLDYLNLSHNSLEGTIPTSIDQVKGLQDLDLSFNKLSGPLPTSIEKLQKLTHLNLSYNNFTGEVPSSGAFRKLNLTSFLGNTGLCGRWIELPHCKLTTRHHHDSKRSVV-ILATSVGLTLLLVFCLAFMVLI
B8LLV1_______________QLGNMTSLQNLNLASNQLTGEIPNTLGQLDNLQYLVLGNNRLSGVIPPSISKIPNLIELDLSSNNLSGKIPVS--LFQVHKYNFSGNHINCSASSPHPCASTSSSNSGSSKRSKIGILAGTIGGGLVIILVLGLLLLL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain