SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene44077

Length: 229 nt

UniGene Fasta

>sp_v1.1_unigene44077
TTTGCATTCTATATGACTAGATATCTTTTCATTTTGAATGACATGAAGGAAATGACTCCTGAGCAACTTCAGGAAGCTTTGAAGAAAACATTTGCTGTTACAAAAAATAAAGGAAAACTCCGCAAGATATGGGATAGCGGCAAAACTATTTACAACATGGCTTCTTGGGGTGCTACAGCTGTTGGGATATACTGTAATCCAACAACAACCAGAGCAGCATCTAAAGCCC

Ace file of the UniGene sp_v1.1_unigene44077

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	65%
Blast2go	uncharacterized protein	-	-	3.28379e-20	69%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P0Y3

Fln msg: STOP codon was not found. Distance to subject end: 12 aas, your sequence is shorter than subject: 76 - 291

Fln protein: FAFYMTRYLFILNDMKEMTPEQLQEALKKTFAVTKNKGKLRKIWDSGKTIYNMASWGATAVGIYCNPTTTRAASKA

Protein Length: 77

Fln nts: TTTGCATTCTATATGACTAGATATCTTTTCATTTTGAATGACATGAAGGAAATGACTCCTGAGCAACTTCAGGAAGCTTTGAAGAAAACATTTGCTGTTACAAAAAATAAAGGAAAACTCCGCAAGATATGGGATAGCGGCAAAACTATTTACAACATGGCTTCTTGGGGTGCTACAGCTGTTGGGATATACTGTAATCCAACAACAACCAGAGCAGCATCTAAAGCCC

Fln Alignment:

sp_v1.1_unigene44077___AFYMTRYLFILNDMKEMTPEQLQEALKKTFAVTKNKGKLRKIWDSGKTIYNMASWGATAVGIYCNPTTTRAASKA
A9P0Y3_______________ACFMATYLSTLKQTKELTPKQLQKALSKTFSTTKKKGKLRKMWDSSKVIYNVVSWGATAVGIYQNPALIRAASVA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain