SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene43672

Length: 433 nt

UniGene Fasta

>sp_v1.1_unigene43672
CGAGGAATTTAGCTCAAGGGGAAGAATCAGTTGGTCATGATTCCATGGCGCAGCTTCCTGCTGATTCTGATAATCTTCATAGTACTTTTTTCTGCACAGGCCGAGGGGGAGGATTATCCGCATACCACTTTCGCCTTCGACGGATTCAATGGAAGTCACTTGATCTTGGAGGCCGAGGCTTCTGTTATTCACTCCAAATCCGCTCTCGCCCTTACAAATCACTCGCATTTCATTTTAGGCCGCGCGTTGTATTCAGATCCAGTGCAGATGAAGAGCAACGAGACGGTTTCGTCCTTCAGCACTACCTTCGTTTTCTCCATTGTGCCTCCTTCGTCTGACGCAGGCGGGCACGGAATAGCCTTCATCATGACGCCTTACACATCTCCCATGGGTGCTCTGTCGGCTGAGTATATGGGCCTGCTTAACCTCACCA

Ace file of the UniGene sp_v1.1_unigene43672

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Kinase, putative n=1 Tax=Ricinus communis RepID=B9SKY8_RICCO	-	-	9.0e-09	34%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%
Blast2go	unknown [Picea sitchensis]	-	-	1.82873e-31	79%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Legume lectin domain	IPR001220	-	1.82873e-31	79%
Blast2go	Concanavalin A-like lectin/glucanase	IPR008985	-	1.82873e-31	79%
Blast2go	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	1.82873e-31	79%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LLJ6

Fln msg: Distance to subject end: 568 aas, your sequence is shorter than subject: 132 - 704

Fln protein: MIPWRSFLLILIIFIVLFSAQAEGEDYPHTTFAFDGFNGSHLILEAEASVIHSKSALALTNHSHFILGRALYSDPVQMKSNETVSSFSTTFVFSIVPPSSDAGGHGIAFIMTPYTSPMGALSAEYMGLLNLT

Protein Length: 133

Fln nts: CGAGGAATTTAGCTCAAGGGGAAGAATCAGTTGGTC_-_ATGATTCCATGGCGCAGCTTCCTGCTGATTCTGATAATCTTCATAGTACTTTTTTCTGCACAGGCCGAGGGGGAGGATTATCCGCATACCACTTTCGCCTTCGACGGATTCAATGGAAGTCACTTGATCTTGGAGGCCGAGGCTTCTGTTATTCACTCCAAATCCGCTCTCGCCCTTACAAATCACTCGCATTTCATTTTAGGCCGCGCGTTGTATTCAGATCCAGTGCAGATGAAGAGCAACGAGACGGTTTCGTCCTTCAGCACTACCTTCGTTTTCTCCATTGTGCCTCCTTCGTCTGACGCAGGCGGGCACGGAATAGCCTTCATCATGACGCCTTACACATCTCCCATGGGTGCTCTGTCGGCTGAGTATATGGGCCTGCTTAACCTCACCA

Fln Alignment:

sp_v1.1_unigene43672___VMIPWRSXXXXXXXXXXXX--SAQAEGEDYPH--TTFAFDGFNGSHLILEAEASVIHSKSALALTNHSHFILGRALYSDPVQMKSNEXXXXXXXXXXXXXXPPSSDAGGHGIAFIMTPYTSPMGALSAEYMGLLNLT
B8LLJ6_______________MMLPWRSLLLIALSYIVIPLLPAQAEEED-PHRPTTFVFDGFNGSHLILEAGASGIDSQSVLAVTNQSEFMFGRALYPIPVQMKSNHTLSSFSTTFVFSIVHPPSDAGGHGLAFVMTPYTSSMGALPAQHLGLLNLT

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain