SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene43664

Length: 403 nt

UniGene Fasta

>sp_v1.1_unigene43664
TCTGCCTGGTATTCTGGGATTGTATAAGCATCTCAAGACTTCTGGATACCAGATTTTCTTTCTCACAGGAAGGGATGAATCTCAACGTAACATTACAGAAGAGAATCTCGTCCTGCAGGGGTATACTGACTATGCTGGACTTATTTTAAGGGAGCGCAAAGCAAAAGGGAAAAGCGCAGTAGTTTTCAAGTCAGAAAAGAGGGAGGAATTGATGAAGAATGGGTATCGTATATGGGGCAATGTTGGAGATCAGTGGAGCGATATTGTCGGAACCGCTGTGGGTGCTCGTACATTCAAGCTTCCTAATCCTATGTACTTCGTTCCTTGACAGCTCCAAGTTAGATATAGGCCTTGGTAGCTCCAAGTTAGTTATAGGCTCTGCCTGTAAGAAGTAAAGAACAAG

Ace file of the UniGene sp_v1.1_unigene43664

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative acid phosphatase (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVJ4_PINPS	-	-	6.0e-31	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	57%
Blast2go	acid phosphatase 1	-	-	1.19661e-30	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Acid phosphatase (Class B)	IPR005519	-	1.19661e-30	71%
Blast2go	HAD-like domain	IPR023214	-	1.19661e-30	71%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AA42

Fln msg: your sequence is shorter than subject: 109 - 254

Fln protein: LPGILGLYKHLKTSGYQIFFLTGRDESQRNITEENLVLQGYTDYAGLILRERKAKGKSAVVFKSEKREELMKNGYRIWGNVGDQWSDIVGTAVGARTFKLPNPMYFVP*

Protein Length: 110

Fln nts: TCTGCCTGGTATTCTGGGATTGTATAAGCATCTCAAGACTTCTGGATACCAGATTTTCTTTCTCACAGGAAGGGATGAATCTCAACGTAACATTACAGAAGAGAATCTCGTCCTGCAGGGGTATACTGACTATGCTGGACTTATTTTAAGGGAGCGCAAAGCAAAAGGGAAAAGCGCAGTAGTTTTCAAGTCAGAAAAGAGGGAGGAATTGATGAAGAATGGGTATCGTATATGGGGCAATGTTGGAGATCAGTGGAGCGATATTGTCGGAACCGCTGTGGGTGCTCGTACATTCAAGCTTCCTAATCCTATGTACTTCGTTCCTTGA___CAGCTCCAAGTTAGATATAGGCCTTGGTAGCTCCAAGTTAGTTATAGGCTCTGCCTGTAAGAAGTAAAGAACAAG

Fln Alignment:

sp_v1.1_unigene43664___LPGILGLYKHLKTSGYQIFFLTGRDESQRNITEENLVLQGYTDYAGLILRERKAKGKSAVVFKSEKREELMKNGYRIWGNVGDQWSDIVGTAVGARTFKLPNPMYFV
D5AA42_______________LPSSLLLYNRLLARGFKIFLLTGRDESQRNGTVHNLFQAGYKGWAGLILRGVNEQGSQASAYKPEKRAELVKKGYRLWGSVGDQWSDLSGPYEASRSFKLPNPMYYI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain