SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene43453

Length: 256 nt

UniGene Fasta

>sp_v1.1_unigene43453
GGCGAGCAGGTCATCTGGATGAGGCACATGATTTGATTAAAAATATGCCTATCAAACCGTCTGCAGGTGTGTGGGGGGCCTTGCTTGGTGCTTGCCGAATTCACTGCAATATTGAACTAGGGGAATATGTTGCGGACTGTCTGTTTGACTTAGAACCTGCAAATGCTGGATATTATGTATTAATTTCAAATATCTATGCCGCTGCAGGTAGGTGGGATGACATGGTGAAGGTGAGACAGTTGTTGAAGAACAGGGG

Ace file of the UniGene sp_v1.1_unigene43453

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%
Blast2go	tetratricopeptide-like helical	-	-	1.74847e-29	79%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5ADG9

Fln msg: Distance to subject end: 139 aas, your sequence is shorter than subject: 84 - 312

Fln protein: RAGHLDEAHDLIKNMPIKPSAGVWGALLGACRIHCNIELGEYVADCLFDLEPANAGYYVLISNIYAAAGRWDDMVKVRQLLKNR

Protein Length: 85

Fln nts: GGCGAGCAGGTCATCTGGATGAGGCACATGATTTGATTAAAAATATGCCTATCAAACCGTCTGCAGGTGTGTGGGGGGCCTTGCTTGGTGCTTGCCGAATTCACTGCAATATTGAACTAGGGGAATATGTTGCGGACTGTCTGTTTGACTTAGAACCTGCAAATGCTGGATATTATGTATTAATTTCAAATATCTATGCCGCTGCAGGTAGGTGGGATGACATGGTGAAGGTGAGACAGTTGTTGAAGAACAGGGG

Fln Alignment:

sp_v1.1_unigene43453___RAGHLDEAHDLIKNMPIKPSAGVWGALLGACRIHCNIELGEYVADCLFDLEPANAGYYVLISNIYAAAGRWDDMVKVRQLLKNR
D5ADG9_______________RAGHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain