SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene43364

Length: 247 nt

UniGene Fasta

>sp_v1.1_unigene43364
ATGGGATACTCTGTGATTCTTTGGGGTTTNATTCGAAAACATTGATAATTGTTCACATTACTCCCAGTTATGCAGATGTTCAAGAGACAATCTCTTCTCTTAGTTTTGCAGCTAGAGTTCGAAACATTGAATTAAGCCTTGGAAGCCGTGACACCATAAAGAAGTGGAGAGATGTGGCAAACGAAGCTCGCAAAAATTGTATGAAAAGGAGAAGGAAGTTTCTGAGCTAAGCTTGGAGGTTATTGGG

Ace file of the UniGene sp_v1.1_unigene43364

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	kinesin motor protein-related	-	-	2.0e-15	59%
FL-Next	sp=Geminivirus Rep-interacting motor protein; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	59%
Blast2go	kinesin motor	-	-	4.34812e-17	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	cellular process	GO:0009987	Biological Process	4.34812e-17	79%
Blast2go	microtubule binding	GO:0008017	Molecular Function	4.34812e-17	79%
Blast2go	cell plate	GO:0009504	Cellular Component	4.34812e-17	79%
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	4.34812e-17	79%
Blast2go	phragmoplast	GO:0009524	Cellular Component	4.34812e-17	79%
Blast2go	plasma membrane	GO:0005886	Cellular Component	4.34812e-17	79%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Kinesin, motor domain	IPR001752	-	4.34812e-17	79%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: Q9LX99

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 777 aas, your sequence is shorter than subject: 76 - 1273

Fln protein: GILCDSLGFNSKTLIIVHITPSYADVQETISSLSFAARVRNIELSLGSRDTIKKWRDVANEARKNCMKRRRKFLS*

Protein Length: 77

Fln nts: ATGGGATACTCTGTGATTCTTTGGGGTTTaATTCGAAAACATTGATAATTGTTCACATTACTCCCAGTTATGCAGATGTTCAAGAGACAATCTCTTCTCTTAGTTTTGCAGCTAGAGTTCGAAACATTGAATTAAGCCTTGGAAGCCGTGACACCATAAAGAAGTGGAGAGATGTGGCAAACGAAGCTCGCAAAAATTGTATGAAAAGGAGAAGGAAGTTTCTGAGCTAAGCTTGGAGGTTATTGGG

Fln Alignment:

sp_v1.1_unigene43364___ILCDSLGFNSKTLIIVHITPSYADVQETISSLSFAARVRNIELSLGSRDTIKKWRDVANEARKNCMKRRRK
Q9LX99_______________VLADSLGGSSKTLMIVNICPSVQTLSETISCLNYAARARNTVPSLGNRDTIKKWRDVASDARKELLEKERE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain