SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene43198

Length: 450 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

>sp_v1.1_unigene43198
ATGGGGCTTGCTTGGTTGTTGATGCTCTTGAGCCTTCTGTGAAGGAGGAATTGATAAAGACTGTGTGCAGTAAGGAGATTACGGCATATCARCAGATATTTGAAGGGACAGAGTTGGCGAAATTGGATAAAGCAGAGCGCCGTTATGCTTGGATTAAACGTCAGCTACGAGCAAATGAAGAAATTTGGCAGATTTTCCCTKCTTCTTGGCGGGTTACTTATTTGCTCTGTATCCAGTTTTGTAAAGTGACAAGGGCACAACTAACTGATATTCTTGATGGTCTGAAGGAGAAGCCGGATGTTGGAGCACTACTTCAGGCATTGCAAAGAACCCTTGAATTTGAGGAAGAGTTAGCTGAGAGATTTGGAGCAGGCACTGGTCGTGGCAAAGATGGTGAAAGTGATACTGAAGAGTTGGATGGTGATTTAGAGCATGAAAGTCGAAGTGCAG

Ace file of the UniGene sp_v1.1_unigene43198

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Vps53_N domain containing protein	-	-	1.00053e-42	55%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	73%
Blast2go	protein	-	-	0.0	78%

Source	GOs	Term	Type	Identity
Blast2go	response to osmotic stress	GO:0006970	Biological Process	78%
Blast2go	response to heat	GO:0009408	Biological Process	78%
Blast2go	mitochondrion	GO:0005739	Cellular Component	78%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9RGR4

Fln msg: Distance to subject end: 498 aas, your sequence is shorter than subject: 149 - 891

Fln protein: GACLVVDALEPSVKEELIKTVCSKEITAYQQIFEGTELAKLDKAERRYAWIKRQLRANEEIWQIFPSSWRVTYLLCIQFCKVTRAQLTDILDGLKEKPDVGALLQALQRTLEFEEELAERFGAGTGRGKDGESDTEELDGDLEHESRSA

Protein Length: 150

Fln nts: ATGGGGCTTGCTTGGTTGTTGATGCTCTTGAGCCTTCTGTGAAGGAGGAATTGATAAAGACTGTGTGCAGTAAGGAGATTACGGCATATCAgCAGATATTTGAAGGGACAGAGTTGGCGAAATTGGATAAAGCAGAGCGCCGTTATGCTTGGATTAAACGTCAGCTACGAGCAAATGAAGAAATTTGGCAGATTTTCCCTtCTTCTTGGCGGGTTACTTATTTGCTCTGTATCCAGTTTTGTAAAGTGACAAGGGCACAACTAACTGATATTCTTGATGGTCTGAAGGAGAAGCCGGATGTTGGAGCACTACTTCAGGCATTGCAAAGAACCCTTGAATTTGAGGAAGAGTTAGCTGAGAGATTTGGAGCAGGCACTGGTCGTGGCAAAGATGGTGAAAGTGATACTGAAGAGTTGGATGGTGATTTAGAGCATGAAAGTCGAAGTGCAG

Fln Alignment:

sp_v1.1_unigene43198___ACLVVDALEPSVKEELIKTVCSKEITAYQQIFEGTELAKLDKAERRYAWIKRQLRANEEIWQIFPSSWRVTYLLCIQFCKVTRAQLTDILDGLKEKPDVGALLQALQRTLEFEEELAERFGAGTGRGKDGESDTEELD
A9RGR4_______________ACLVIDGLDPSAKEELIRNVCSKELTAYQQIFQGTEVAKLEKAERRYAWIKRQLRSNEEVWSIFPPSWRVAHTLCIQFCKVTRAQLMEILDTAQPKPEVGTLLQALQRTLEFEEELAERFGGSEGKKQEEESDNEGFD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain