SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene43030

Length: 495 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene43030
GCCACTTGCAATAATAAGTGCATTACAGACTGCTGGGAGAATTATTAATGCAGAGGCAATGGACAGTGCTGAGTTGTGGTTGGCTTGGGTGCAAAGCTCCAGCTGGGCAGCAGCTTTATTTTTCCAGTTCTTGCCAAATGTGCTGATTTTTGTGAGCATGTACTTGGTTATTCCTGCAGCTCTTTCTTCACTTTCCAAGTTTGAAAGCCATTTGACTGTCTCAGGAGAGCATCGGGCTGCATTGGTAAAAACATTCTGCTTTTTCCTAGTCAATTTGATTTTTCTGCGGGCACTGGTGGAGTCATCCTTGGAGGGCACCCTTCTCAAGATGGGTCAATGTTATATGGATGGTGATGATTGCAAGAAATTGAGCAATACATGAGTGCATCTTTCTGTCCAAGTCTTGTCTTTCTTCTCTTGCCTTCCTTATTACAAGCACTTTCTTGGGCATATCTTATGACTTGCTAGCCCCAATTCCTTGGATAAAGAAAAAAC

Ace file of the UniGene sp_v1.1_unigene43030

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF221 domain containing protein	-	-	2.0e-07	26%
FL-Next	tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).	-	-	0.0	73%
Blast2go	protein	-	-	0.0	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein targeting to vacuole	GO:0006623	Biological Process	0.0	78%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Domain of unknown function DUF221	IPR003864	-	0.0	78%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7MBR9

Fln msg: Separated hits, possible frame ERROR between 370 and 390, Distance to subject end: 225 aas, your sequence is shorter than subject: 165 - 802

Fln protein: PLAIISALQTAGRIINAEAMDSAELWLAWVQSSSWAAALFFQFLPNVLIFVSMYLVIPAALSSLSKFESHLTVSGEHRAALVKTFCFFLVNLIFLRALVESSLEGTLLKMGQCYMDGDDCKKxxxxxxxxFLSKSCLSSLAFLITSTFLGISYDLLAPIPWIKKK

Protein Length: 166

Fln nts: GCCACTTGCAATAATAAGTGCATTACAGACTGCTGGGAGAATTATTAATGCAGAGGCAATGGACAGTGCTGAGTTGTGGTTGGCTTGGGTGCAAAGCTCCAGCTGGGCAGCAGCTTTATTTTTCCAGTTCTTGCCAAATGTGCTGATTTTTGTGAGCATGTACTTGGTTATTCCTGCAGCTCTTTCTTCACTTTCCAAGTTTGAAAGCCATTTGACTGTCTCAGGAGAGCATCGGGCTGCATTGGTAAAAACATTCTGCTTTTTCCTAGTCAATTTGATTTTTCTGCGGGCACTGGTGGAGTCATCCTTGGAGGGCACCCTTCTCAAGATGGGTCAATGTTATATGGATGGTGATGATTGCAAGAAATTxxxxxxxxxxxxxxxxxxxxxCTTTCTGTCCAAGTCTTGTCTTTCTTCTCTTGCCTTCCTTATTACAAGCACTTTCTTGGGCATATCTTATGACTTGCTAGCCCCAATTCCTTGGATAAAGAAAAAAC

Fln Alignment:

sp_v1.1_unigene43030___PLAIISALQTAGRIINAEAMDSAELWLAWVQSSSWAAALFFQFLPNVLIFVSMYLVIPAALSSLSKFESHLTVSGEHRAALVKTFCFFLVNLIFLRALVESSLEGTLLKMGQCYMDGDDCKKLxxxxxxxFLSKSCLSSLAFLITSTFLGISYDLLAPIPWIKKK
D7MBR9_______________PLALISALVSAGRIFNAEALDSAQSWLAWVQTSGWIGSLIFQFLPNVFIFVSMYIVIPSALSYLSKFERHLTVSGEQRAALLKMVCFFLVNLIILKALVESSLESALLKMSRCYLDGEDCKRIxxxxxxxFLSRSCVSALAFLITSTFLGISFDLLAPIPWIKKK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain