SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene42955

Length: 456 nt

UniGene Fasta

>sp_v1.1_unigene42955
GGATGAAGCTTGTATGTTTCCAAGATCAACTCATGAAACATTTTCGCAAAAGCTTTATCAAACGTTTAAGAATCACAAACGCTTCAGCAAACCAAAACTTTCTCGTACAGATTTCACTATTGGTCATTATGCTGGTGATGTTACATATCAGACCGATTTGTTCATTGACAAGAATAAAGATTATGTTGTTGCAGAACATCAAGCTCTGTTAAATGCTTCAAACTGTTCTTTGTTGCGGGTCTCTTTCCTCCTCTCCCTGAGGAGTCTTCTAAGTCATCTAATTTCTCCTCTATTGGCACTCGCTTTAAGCAACAACTGCAATCTCTTCTGGAAACACTGAGCTCAACAGAGCCTCATTACATAAGATGCGTTAACCAAACAGTTTACTGAAGCCAGGCATTTTGAGAATCACAATGTCTTGCAACAACTACGTTGTGGAGTGAGGGTCGATTGATA

Ace file of the UniGene sp_v1.1_unigene42955

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	myosin XI, putative	-	-	3.00004e-41	81%
FL-Next	tr=Myosin subfamily XI heavy chain; Petroselinum crispum (Parsley) (Petroselinum hortense).	-	-	0.0	60%
Blast2go	myosin	-	-	4.33471e-40	70%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Myosin head, motor domain	IPR001609	-	4.33471e-40	70%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: Q9ATB7

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 856 aas, your sequence is shorter than subject: 151 - 1515

Fln protein: DEACMFPRSTHETFSQKLYQTFKNHKRFSKPKLSRTDFTIGHYAGDVTYQTDLFIDKNKDYVVAEHQALLNASNCSLLRVSFLLSLRSLLSHLISPLLALALSNNCNLFWKH*AQQSLIT*DALTKQFTEARHFENHNVLQQLRCGVRVD*

Protein Length: 152

Fln nts: GGATGAAGCTTGTATGTTTCCAAGATCAACTCATGAAACATTTTCGCAAAAGCTTTATCAAACGTTTAAGAATCACAAACGCTTCAGCAAACCAAAACTTTCTCGTACAGATTTCACTATTGGTCATTATGCTGGTGATGTTACATATCAGACCGATTTGTTCATTGACAAGAATAAAGATTATGTTGTTGCAGAACATCAAGCTCTGTTAAATGCTTCAAACTGTTCTTTGTTGCGGGTCTCTTTCCTCCTCTCCCTGAGGAGTCTTCTAAGTCATCTAATTTCTCCTCTATTGGCACTCGCTTTAAGCAACAACTGCAATCTCTTCTGGAAACACTGAGCTCAACAGAGCCTCATTACATAAGATGCGTTAACCAAACAGTTTACTGAAGCCAGGCATTTTGAGAATCACAATGTCTTGCAACAACTACGTTGTGGAGTGAGGGTCGATTGATA

Fln Alignment:

sp_v1.1_unigene42955___DEACMFPRSTHETFSQKLYQTFKNHKRFSKPKLSRTDFTIGHYAGDVTYQTDLFIDKNKDYVVAEHQALLNASNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNCNLFWKH*AQQSLIT*DALTKQFTEARHFENHNVLQQLRCG
Q9ATB7_______________DEACMFPRSTHETFAQKLYQTFKNHNRFSKPKLSRSDFTIGHYAGDVTYQTDLFLDKNKDYVVAEHQSLLNASSCSFVSSLFPPSEESSKSSKFSSIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNLLKPAIFENHNVLQQLRCG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain