SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene42849

Length: 318 nt

Origin of reads: Biogeco_1

UniGene Fasta

>sp_v1.1_unigene42849
GGAAATCCAAGAAGGGAAAGGTGGTGTGAAGGTGTGCGTTACAGGAGCAGGGGGGTACATTGGATCATGGCTCGTCAAGAATCTTCTCCAAAGAGGCTACACCGTCAACGCCACTCTCAGAGATCCACAAAATGAGGCAAAAATTGGGCCTCTGCTGTCGCTGCCTGGGGCTGCAGAGAGACTGAAGCTCTTCCAGGCAGATTTGTGCGAAGAGCACGCCTTCGATTCCGCAGTGGAGGGCTGTCAAGGGGTGTTCCACGTGGCTAGTCCTATGGACTTTTCCAAACTCACAGAGGATGATTTTGTTGGGCCTGCTGT

Ace file of the UniGene sp_v1.1_unigene42849

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Anthocyanidin reductase n=1 Tax=Ginkgo biloba RepID=Q5XLY0_GINBI	-	-	2.0e-28	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	dihydroflavonol 4-reductase	-	-	0.0	76%

Source	InterPros	Term	Type	e value	Identity
Blast2go	NAD-dependent epimerase/dehydratase	IPR001509	-	0.0	76%
Blast2go	NAD(P)-binding domain	IPR016040	-	0.0	76%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P186

Fln msg: Distance to subject end: 120 aas, atg_distance in limit (1-15): atg_distance = 2, W2: There is no M at the beginning, your sequence is shorter than subject: 105 - 227

Fln protein: EIQEGKGGVKVCVTGAGGYIGSWLVKNLLQRGYTVNATLRDPQNEAKIGPLLSLPGAAERLKLFQADLCEEHAFDSAVEGCQGVFHVASPMDFSKLTEDDFVGPA

Protein Length: 106

Fln nts: GGAAATCCAAGAAGGGAAAGGTGGTGTGAAGGTGTGCGTTACAGGAGCAGGGGGGTACATTGGATCATGGCTCGTCAAGAATCTTCTCCAAAGAGGCTACACCGTCAACGCCACTCTCAGAGATCCACAAAATGAGGCAAAAATTGGGCCTCTGCTGTCGCTGCCTGGGGCTGCAGAGAGACTGAAGCTCTTCCAGGCAGATTTGTGCGAAGAGCACGCCTTCGATTCCGCAGTGGAGGGCTGTCAAGGGGTGTTCCACGTGGCTAGTCCTATGGACTTTTCCAAACTCACAGAGGATGATTTTGTTGGGCCTGCTGT

Fln Alignment:

sp_v1.1_unigene42849___EIQEGKGGVKVCVTGAGGYIGSWLVKNLLQRGYTVNATLRDPQNEAKIGPLLSLPGAAERLKLFQADLCEEHAFDSAVEGCQGVFHVASPMDFSKLTEDDFVGPA
A9P186_______________QIQEAKAGVKMCVTGAGGYIGSWLVKNLLQRGYAVNATLRDPQNEAKAGPLLSLPGAAERLKLFQADLCEEKAFDSAVEGCEGVFHVASPMDFSKLSEDDFVEPA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain