SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene41569

Length: 364 nt

UniGene Fasta

>sp_v1.1_unigene41569
ATGGGGAAAAGGAGCAGTTAGAGTATGAATATGAAGCCTTGATACATGAACTTGAGGAACGTGCCTCGTATTTAGAGTTTTCAAAGAAACAGCTGCAGGAGCAGCTGCAAACCCTCAGAGATGAGCATGCAGTTTCTTTACATAGTATAAGCACCCTTGAGAGTAAGGTAGAAAAGCTCCAACAAGAGCTTGATGAGCAAGAAGCAAGGTTTGCAGCTGATAGGAATGAGATGGTCCTGTCCAAGACAGAACTGGAGAAAAGGGCCAACAGGGCAGAAGCAGCGTGGAAGAAGACTCGATGGAATAATGCTTGCATAGTTGAACAACTTCAGAAAGAGCTTGAACGGCTTTCTCTACAGATTTC

Ace file of the UniGene sp_v1.1_unigene41569

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJE4_RICCO	-	-	1.0e-18	44%
FL-Next	tr=ATP binding protein, putative; Ricinus communis (Castor bean).	-	-	0.0	44%
Blast2go	atp binding	-	-	2.30661e-18	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	vacuole	GO:0005773	Cellular Component	2.30661e-18	63%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: B9RJE4

Fln msg: Distance to subject end: 1336 aas, your sequence is shorter than subject: 120 - 1998

Fln protein: GEKEQLEYEYEALIHELEERASYLEFSKKQLQEQLQTLRDEHAVSLHSISTLESKVEKLQQELDEQEARFAADRNEMVLSKTELEKRANRAEAAWKKTRWNNACIVEQLQKELERLSLQI

Protein Length: 121

Fln nts: ATGGGGAAAAGGAGCAGTTAGAGTATGAATATGAAGCCTTGATACATGAACTTGAGGAACGTGCCTCGTATTTAGAGTTTTCAAAGAAACAGCTGCAGGAGCAGCTGCAAACCCTCAGAGATGAGCATGCAGTTTCTTTACATAGTATAAGCACCCTTGAGAGTAAGGTAGAAAAGCTCCAACAAGAGCTTGATGAGCAAGAAGCAAGGTTTGCAGCTGATAGGAATGAGATGGTCCTGTCCAAGACAGAACTGGAGAAAAGGGCCAACAGGGCAGAAGCAGCGTGGAAGAAGACTCGATGGAATAATGCTTGCATAGTTGAACAACTTCAGAAAGAGCTTGAACGGCTTTCTCTACAGATTTC

Fln Alignment:

sp_v1.1_unigene41569___EQLEYEYEALIHELEERASYLEFSKKQLQEQLQTLRDEHAVSLHSISTLESKVEKLQQELDEQEARFAADRNEMVLSKTELEKRANRAEAAWKKTRWNNACIVEQLQKELERLSLQI
B9RJE4_______________DQMECYYEALVQELEE-------NQRQLLQELQNLRNEHSTCLYAISSTKADMESMHQGLNEQILRLAGDKHDMESFNKELERRALTAEAALKRARLNYSIAVDQLQKDLELLSFQV

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
241		33		66	0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain