SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene41405

Length: 344 nt

UniGene Fasta

>sp_v1.1_unigene41405
ACTTCAACAGGCTGCAGCATCAGCTCGACGGGGTTCATATGACAGCGTTGGTGTTGGGGGGTATTCTTCAGGATTAGTAACCACAGAGCAGATGCACAATTTGGTTTCGAACTTGAACATTCTTGAACAGATTGGAAGTTTTGAGATCAATCATGTATTTACACATAGCCAAAGGTTAAACAGTGAGGCAATAGTTGATTTTGTAAAGGCCCTCTGCAAGGTCTCCATGGAAGAATTGCGATCTCCTACTGACCCCCGAGTTTTCAGCCTAACCAAGATTGTAGAGATTGCGCATTATAATATGAACCGGATCAGGCTGGTTTGGTCTCCCATCTGGCATGTGC

Ace file of the UniGene sp_v1.1_unigene41405

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[R] COG5307 SEC7 domain proteins	-	-	4.0e-15	44%
FL-Next	tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).	-	-	0.0	83%
Blast2go	protein	-	-	1.86485e-39	90%

Source	GOs	Term	Type	e value	Identity
Blast2go	megagametogenesis	GO:0009561	Biological Process	1.86485e-39	90%
Blast2go	nucleus	GO:0005634	Cellular Component	1.86485e-39	90%
Blast2go	cytosol	GO:0005829	Cellular Component	1.86485e-39	90%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A9RIC5

Fln msg: Distance to subject end: 618 aas, your sequence is shorter than subject: 114 - 1755

Fln protein: LQQAAASARRGSYDSVGVGGYSSGLVTTEQMHNLVSNLNILEQIGSFEINHVFTHSQRLNSEAIVDFVKALCKVSMEELRSPTDPRVFSLTKIVEIAHYNMNRIRLVWSPIWHV

Protein Length: 115

Fln nts: ACTTCAACAGGCTGCAGCATCAGCTCGACGGGGTTCATATGACAGCGTTGGTGTTGGGGGGTATTCTTCAGGATTAGTAACCACAGAGCAGATGCACAATTTGGTTTCGAACTTGAACATTCTTGAACAGATTGGAAGTTTTGAGATCAATCATGTATTTACACATAGCCAAAGGTTAAACAGTGAGGCAATAGTTGATTTTGTAAAGGCCCTCTGCAAGGTCTCCATGGAAGAATTGCGATCTCCTACTGACCCCCGAGTTTTCAGCCTAACCAAGATTGTAGAGATTGCGCATTATAATATGAACCGGATCAGGCTGGTTTGGTCTCCCATCTGGCATGTGC

Fln Alignment:

sp_v1.1_unigene41405___LQQAAASARRXXXXXXXXXXXXXXLVTTEQMHNLVSNLNILEQIGSFEINHVFTHSQRLNSEAIVDFVKALCKVSMEELRSPTDPRVFSLTKIVEIAHYNMNRIRLVWSPIWHV
A9RIC5_______________LQYAAAAARRGSYDSAGVGGGSAGIVTTEQMNNLVSNLNMLEQIGSFEVNKIFTRSQRLNSEAIVDFVKALCKVSMEELRSPSDPRVFSLTKIVEISHFNMTRIRLVWSKMWSV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain