SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene41068

Length: 479 nt

UniGene Fasta

>sp_v1.1_unigene41068
TGATCTTCGGGATTCAAATGACGATAATGATCTGCATATTTTACATTCACTCGAAAGAATGTTTGATAACTGGGCCATTGAACCGGTGGTCGTTCAAAGCCCATTGATTCAGATGCTGAAGAGGATGCTCCAATACCACCATTTAAGACCTTTCTTTGTCCTCTGACAAAGGAAGTAATGAAGAATCCTGTAGTTCTTGAATCCTCTCAATCATATGAGCGCAGTGCAATACAGCATTGGTTTGCACATTGTAGAGAACAAGGTCGTGACCCACATGCCGGTAACTGGTCAGGTCCTCAAGTCACTAGAGCTACGGCCTAATATAAGTCTGTATGGAACTATTCAAGAATGGGTTGACAGGAATGTTGATATTCGCATAAAAAGTGCGATTCAGCATCTAGGAAGCAGTGCTTCTGTAGAGGACTGTGAACGGGCCCTGGATGATATCTATAAAATATCTGAAGAATATCCTTCAAGTA

Ace file of the UniGene sp_v1.1_unigene41068

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] ref\|NP_001077833.1\| armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] sp\|Q9SFX2.1\|PUB43_ARATH RecName	-	-	6.0e-13	57%
FL-Next	sp=U-box domain-containing protein 43; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	57%
Blast2go	protein	-	-	5.70262e-22	76%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: sp_plants

Fln subject: Q9SFX2

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 673 aas, Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 80 - 811

Fln protein: TGGRSKPIDSDAEEDAPIPPFKTFLCPLTKEVMKNPVVLESSQSYERSAIQHWFAHCREQGRDPHAGNWSGPQVTRATA*

Protein Length: 81

Fln nts: TGATCTTCGGGATTCAAATGACGATAATGATCTGCATATTTTACATTCACTCGAAAGAATGTTTGATAACTGGGCCATTGAACCGGTGGTCGTTCAAAGCCCATTGATTCAGATGCTGAAGAGGATGCTCCAATACCACCATTTAAGACCTTTCTTTGTCCTCTGACAAAGGAAGTAATGAAGAATCCTGTAGTTCTTGAATCCTCTCAATCATATGAGCGCAGTGCAATACAGCATTGGTTTGCACATTGTAGAGAACAAGGTCGTGACCCACATGCCGGTAACTGGTCAGGTCCTCAAGTCACTAGAGCTACGGCCTAATATAAGTCTGTATGGAACTATTCAAGAATGGGTTGACAGGAATGTTGATATTCGCATAAAAAGTGCGATTCAGCATCTAGGAAGCAGTGCTTCTGTAGAGGACTGTGAACGGGCCCTGGATGATATCTATAAAATATCTGAAGAATATCCTTCAAGTA

Fln Alignment:

sp_v1.1_unigene41068___FKTFLCPLTKEVMKNPVVLESSQSYERSAIQHWFAHCREQGR
Q9SFX2_______________YEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain