SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene40818

Length: 400 nt

UniGene Fasta

>sp_v1.1_unigene40818
TGTTGTGATGTGCGATAAAGCTCTGCCCGGCGAGCGGTTCCTCGGCCGTATTACTAGGATGAAGAAGGGGCGATTTGCGGAGGTCAAAAAGCTCAATACTATATCTCCTCATAATGATTCTGTTGTAGCTCCTTGTGAGCATGCAGCAGATTGTGGAGGCTGTAAGACACAGAATCTTGCATATTCTGCACAGGTCTGGGCAAAGGAACAACAAGTGCGTGATTTGATAACTCATATAGGACGTTTTCCCATTCGAGGACATGGCTCTGTAGACTACATGAAACCCATTTTACCATGTGATGTTCAATTTCACTACAGGAACAAGATGGAGTTCTCATTTGGAACAAAGAGTTGGAGGCCTGTAGATGTTGTACAAGGACAAGATAGTCTATATACAAAT

Ace file of the UniGene sp_v1.1_unigene40818

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RNA methyltransferase family protein; K00599 [EC:2.1.1.-]	-	-	6.99949e-42	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	rna methyltransferase family protein	-	-	0.0	70%

Source	ECs	Term	Type	e value	Identity
AutoFact	Transferases, Transferring one-carbon groups, Methyltransferases.	EC:2.1.1.-	-	6.99949e-42	63%

Source	KEGGs	Term	e value	Identity
AutoFact	Ubiquinone and other terpenoid-quinone biosynthesis	00130	6.99949e-42	63%
AutoFact	Tetracycline biosynthesis	00253	6.99949e-42	63%
AutoFact	Histidine metabolism	00340	6.99949e-42	63%
AutoFact	Tyrosine metabolism	00350	6.99949e-42	63%
AutoFact	Phenylalanine metabolism	00360	6.99949e-42	63%
AutoFact	Tryptophan metabolism	00380	6.99949e-42	63%
AutoFact	Benzoxazinoid biosynthesis	00402	6.99949e-42	63%
AutoFact	Selenocompound metabolism	00450	6.99949e-42	63%
AutoFact	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	6.99949e-42	63%
AutoFact	Polycyclic aromatic hydrocarbon degradation	00624	6.99949e-42	63%
AutoFact	Methane metabolism	00680	6.99949e-42	63%
AutoFact	Porphyrin and chlorophyll metabolism	00860	6.99949e-42	63%
AutoFact	Carotenoid biosynthesis	00906	6.99949e-42	63%
AutoFact	Phenylpropanoid biosynthesis	00940	6.99949e-42	63%
AutoFact	Flavonoid biosynthesis	00941	6.99949e-42	63%
AutoFact	Anthocyanin biosynthesis	00942	6.99949e-42	63%
AutoFact	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	6.99949e-42	63%
AutoFact	Isoquinoline alkaloid biosynthesis	00950	6.99949e-42	63%
AutoFact	Insect hormone biosynthesis	00981	6.99949e-42	63%
AutoFact	Biosynthesis of type II polyketide products	01057	6.99949e-42	63%
AutoFact	Biosynthesis of alkaloids derived from shikimate pathway	01063	6.99949e-42	63%
AutoFact	Metabolic pathways	01100	6.99949e-42	63%
AutoFact	Biosynthesis of secondary metabolites	01110	6.99949e-42	63%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A989

Fln msg: Distance to subject end: 328 aas, your sequence is shorter than subject: 133 - 575

Fln protein: VVMCDKALPGERFLGRITRMKKGRFAEVKKLNTISPHNDSVVAPCEHAADCGGCKTQNLAYSAQVWAKEQQVRDLITHIGRFPIRGHGSVDYMKPILPCDVQFHYRNKMEFSFGTKSWRPVDVVQGQDSLYTN

Protein Length: 134

Fln nts: TGTTGTGATGTGCGATAAAGCTCTGCCCGGCGAGCGGTTCCTCGGCCGTATTACTAGGATGAAGAAGGGGCGATTTGCGGAGGTCAAAAAGCTCAATACTATATCTCCTCATAATGATTCTGTTGTAGCTCCTTGTGAGCATGCAGCAGATTGTGGAGGCTGTAAGACACAGAATCTTGCATATTCTGCACAGGTCTGGGCAAAGGAACAACAAGTGCGTGATTTGATAACTCATATAGGACGTTTTCCCATTCGAGGACATGGCTCTGTAGACTACATGAAACCCATTTTACCATGTGATGTTCAATTTCACTACAGGAACAAGATGGAGTTCTCATTTGGAACAAAGAGTTGGAGGCCTGTAGATGTTGTACAAGGACAAGATAGTCTATATACAAAT

Fln Alignment:

sp_v1.1_unigene40818___VVMCDKALPGERFLGRITRMKKGRFAEVKKLNTISPHNDSVVAPCEHAADCGGCKTQNLAYSAQVWAKEQQVRDLITHIGRFPIRGHGSVDYMKPILPCDVQFHYRNKMEFSFGTKSWRPVDVVQGQDSLYTN
D5A989_______________VVMCDRALPGERFLGRITRMKKGRFAEVKKLNTISPHNDSVVAPCEHAADCGGCKTQNLAYHAQVWAKEQQVRDLIIHIGRFPILGPGSVDYMKPILPCDVQFYYRNKMEFSFGTKSWRPGDVVQGHDSLYAN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain