SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene40027

Length: 685 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene40027

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Receptor-like protein kinase HSL1 n=2 Tax=Arabidopsis RepID=HSL1_ARATH	-	-	2.0e-33	44%
FL-Next	tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca).	-	-	0.0	44%
Blast2go	receptor protein kinase	-	-	8.26743e-35	60%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to chitin	GO:0010200	Biological Process	8.26743e-35	60%
Blast2go	positive regulation of seed germination	GO:0010030	Biological Process	8.26743e-35	60%
Blast2go	defense response to fungus	GO:0050832	Biological Process	8.26743e-35	60%
Blast2go	catalytic activity	GO:0003824	Molecular Function	8.26743e-35	60%
Blast2go	plasma membrane	GO:0005886	Cellular Component	8.26743e-35	60%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Leucine-rich repeat	IPR001611	-	8.26743e-35	60%
Blast2go	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	8.26743e-35	60%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
443		25		75	0.99649
451		66	33		0.997452
485		50		50	1.0
544	50		50		1.0
610	33	66			0.997459

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain