SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene39886

Length: 707 nt

Origin of reads: Biogeco_1 Uagpf

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene39886 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	DNA replication licensing factor MCM8, putative n=1 Tax=Ricinus communis RepID=B9SGR4_RICCO	-	-	67%
FL-Next	sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress).	-	-	36%
Blast2go	dna replication licensing factor	-	-	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	cellular process	GO:0009987	Biological Process	0.0	72%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Nucleic acid-binding, OB-fold	IPR012340	-	0.0	72%
Blast2go	Nucleic acid-binding, OB-fold-like	IPR016027	-	0.0	72%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
172	50		50		1.0
242	50		50		1.0
267		33		66	0.997452
378		33		66	0.997452
482	66			33	0.997454

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain