SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene39473

Length: 410 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene39473
GGCCTTCACAAGGAGACGACAGTTCTTGGGAATGTAATACCCCTCTACCTCGCACGCCTCCTTGTGAAGGCCTTGTCATGGTTCCCTATGGCCCCTACTGCCCCTACTGGAGGATGCTGCGCAAGGTCTGTAATGTTCATCTCTTTGCCAGCAAGGTTCTAGACGATTCGCAGTCTGTGCGGGAGGCAGAGGTTGGGATGCTACTCAAGACAATTCTGGACCATGAGCGGCAAGGGAAGGCAGTCAACCTCGGGGAGTTGCTCAACATCTATACTGCCAACGTTCTCGGGCAGATGATGCTGAGCAGGCGCGTATTCGATTCCCAAGGGTCGATGGCATGCGAATTCAGGGGAATGGTGGTGGAGCAAATGGAATTGACCGGCAAGTTTATTGTTGGTGACCTGGTGCCG

Ace file of the UniGene sp_v1.1_unigene39473

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Flavonoid 3'-hydroxylase n=1 Tax=Gerbera hybrid cultivar RepID=Q38L00_GERHY	-	-	1.0e-23	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	75%
Blast2go	flavonoid 3 -hydroxylase	-	-	4.06489e-39	67%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome P450	IPR001128	-	4.06489e-39	67%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LME1

Fln msg: Distance to subject end: 282 aas, your sequence is shorter than subject: 136 - 516

Fln protein: PSQGDDSSWECNTPLPRTPPCEGLVMVPYGPYCPYWRMLRKVCNVHLFASKVLDDSQSVREAEVGMLLKTILDHERQGKAVNLGELLNIYTANVLGQMMLSRRVFDSQGSMACEFRGMVVEQMELTGKFIVGDLVP

Protein Length: 137

Fln nts: GGCCTTCACAAGGAGACGACAGTTCTTGGGAATGTAATACCCCTCTACCTCGCACGCCTCCTTGTGAAGGCCTTGTCATGGTTCCCTATGGCCCCTACTGCCCCTACTGGAGGATGCTGCGCAAGGTCTGTAATGTTCATCTCTTTGCCAGCAAGGTTCTAGACGATTCGCAGTCTGTGCGGGAGGCAGAGGTTGGGATGCTACTCAAGACAATTCTGGACCATGAGCGGCAAGGGAAGGCAGTCAACCTCGGGGAGTTGCTCAACATCTATACTGCCAACGTTCTCGGGCAGATGATGCTGAGCAGGCGCGTATTCGATTCCCAAGGGTCGATGGCATGCGAATTCAGGGGAATGGTGGTGGAGCAAATGGAATTGACCGGCAAGTTTATTGTTGGTGACCTGGTGCCG

Fln Alignment:

sp_v1.1_unigene39473___YGPYCPYWRMLRKVCNVHLFASKVLDDSQSVREAEVGMLLKTILDHERQGKAVNLGELLNIYTANVLGQMMLSRRVFDSQGSMACEFRGMVVEQMELTGKFIVGDLVP
B8LME1_______________WAPYGPRWRMLRKVCNIHLFAGKALDDLQPVRETEVGMLLKSILDHERQGKAVNLGELLNVCTANVLGQIMLSKRVFESQGAKASEFREMVVELMVLAGVFNIGDFVP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain