SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene39453

Length: 470 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

>sp_v1.1_unigene39453
TATATACACCATTTACTGGACAACCTTTCTGGCAGCAGCAGTGATAGTTGTGTCGGTCAGCCCTGAGTTGGCATTCACTTCCGGTTTGTCACCATCTACAGAATTCTCCCTGCCGTGCGATGACCTTCAAGGGAAGTACATGAGGTTGCCGTTGGACAAGCCGGGAGATGTCATATGCCTGCCTGCTGATATGGTCGGAAATTCAAACGTGGATTTCTTGATCCCTCCCATCTTTGCAGCCGTGGTTGTGGCAGCTTCGGCCTGCTTTGTCCGCGCGATGGGCCTCTAGGAAATATGAAATGACATTAATGCGGTCCTGTGTGACATTAATGGCATCAGGTTCGTTGGTAATGGTGTTGCTTCCTAGGAAAGAAGGTGCTACTACTTATGTAAATGTATTGCTTTACAGATTACATATCTTATTTGTGCGGTCAACTTAAGTGTAAATTGTAATTGTGTTAAAGTGTAAT

Ace file of the UniGene sp_v1.1_unigene39453

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Ricinus communis (Castor bean).	-	-	0.0	46%
Blast2go	conserved hypothetical protein [Ricinus communis]	-	-	5.05045e-13	64%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: tr_plants

Fln subject: B9SZC3

Fln msg: your sequence is shorter than subject: 96 - 120

Fln protein: IYTIYWTTFLAAAVIVVSVSPELAFTSGLSPSTEFSLPCDDLQGKYMRLPLDKPGDVICLPADMVGNSNVDFLIPPIFAAVVVAASACFVRAMGL*

Protein Length: 97

Fln nts: TATATACACCATTTACTGGACAACCTTTCTGGCAGCAGCAGTGATAGTTGTGTCGGTCAGCCCTGAGTTGGCATTCACTTCCGGTTTGTCACCATCTACAGAATTCTCCCTGCCGTGCGATGACCTTCAAGGGAAGTACATGAGGTTGCCGTTGGACAAGCCGGGAGATGTCATATGCCTGCCTGCTGATATGGTCGGAAATTCAAACGTGGATTTCTTGATCCCTCCCATCTTTGCAGCCGTGGTTGTGGCAGCTTCGGCCTGCTTTGTCCGCGCGATGGGCCTCTAG___GAAATATGAAATGACATTAATGCGGTCCTGTGTGACATTAATGGCATCAGGTTCGTTGGTAATGGTGTTGCTTCCTAGGAAAGAAGGTGCTACTACTTATGTAAATGTATTGCTTTACAGATTACATATCTTATTTGTGCGGTCAACTTAAGTGTAAATTGTAATTGTGTTAAAGTGTAAT

Fln Alignment:

sp_v1.1_unigene39453___IYTIYWTTFLAAAVIVVSVSPELAFTSGLSPSTEFSLPCDDLQGKYMRLPLDKPGDVICLPADMVGNSNVDFLIPPIF
B9SZC3_______________LYAATWTALLTATVAVASFSPEMAFVSAISTSSSFARQCK-AEGT-VRIPLDAPGEILCLPARMFMRSKIDFIVPPVF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain