SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene39409

Length: 632 nt

Origin of reads: Biogeco_1

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene39409

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Vps53_N domain containing protein	-	-	7.9874e-44	57%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	88%
Blast2go	protein	-	-	0.0	87%

Source	GOs	Term	Type	Identity
Blast2go	response to osmotic stress	GO:0006970	Biological Process	87%
Blast2go	response to heat	GO:0009408	Biological Process	87%
Blast2go	mitochondrion	GO:0005739	Cellular Component	87%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Vps53-like, N-terminal	IPR007234	-	0.0	87%

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	Probability
202	66		33	0.997453
203	66		33	0.997453
204		66	33	0.997453
387	50		50	1.0
466	80	20		0.995493
485	20	20		0.99255

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain