SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene39155

Length: 606 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene39155

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR	-	-	1.0e-32	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	26%
Blast2go	catalytic region ribonuclease h	-	-	2.20818e-32	58%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Integrase, catalytic core	IPR001584	-	2.20818e-32	58%
Blast2go	Ribonuclease H-like domain	IPR012337	-	2.20818e-32	58%

Full-Lengther Next Prediction

SNPs (tot: 14)

Position	A %	C %	G %	T %	Probability
372	66		33		0.997454
396	66		33		0.997467
398		66		33	0.997454
399	33		66		0.997456
403	33		66		0.997452
411	33		66		0.997452
427		33		66	0.997452
442			66	33	0.997453
444	66		33		0.997452
459	33			66	0.997452
463			66	33	0.997452
468	66		33		0.997458
492		66	33		0.997455
508			66	33	0.997454

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain