SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene38512

Length: 852 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene38512

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Transcriptional activator DEMETER n=2 Tax=Arabidopsis thaliana RepID=DME_ARATH	-	-	9.0e-27	61%
FL-Next	Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME	-	-	0.0	61%
Blast2go	dme dna n-glycosylase dna-(apurinic or apyrimidinic site) lyase	-	-	1.66625e-26	72%

Source	ECs	Term	Type	e value	Identity
Blast2go	DNA-(apurinic or apyrimidinic site) lyase.	EC:4.2.99.18	-	1.66625e-26	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	embryo development ending in seed dormancy	GO:0009793	Biological Process	1.66625e-26	72%
Blast2go	regulation of gene expression by genetic imprinting	GO:0006349	Biological Process	1.66625e-26	72%
Blast2go	DNA methylation	GO:0006306	Biological Process	1.66625e-26	72%
Blast2go	DNA-(apurinic or apyrimidinic site) lyase activity	GO:0003906	Molecular Function	1.66625e-26	72%
Blast2go	DNA N-glycosylase activity	GO:0019104	Molecular Function	1.66625e-26	72%
Blast2go	polar nucleus	GO:0043078	Cellular Component	1.66625e-26	72%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
123		66		33	0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain