SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
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miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene38270

Length: 728 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene38270

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Exostosin domain containing protein	-	-	3.0e-27	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	56%
Blast2go	secondary cell wall-related glycosyltransferase family 47	-	-	0.0	87%

Full-Lengther Next Prediction

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
487		14		85	0.993534
489		85		14	0.993534
490	71		14		0.984337
492	85	14			0.993535
493		14	85		0.993534
494		87		12	0.992555
495	71		14	14	0.984337
496			87	12	0.992555
497	71	14	14		0.984337
498		14	85		0.993533
501	85			14	0.993533
503	12			75	0.975346
506		10	10	70	0.92259
507	10			90	0.903503
508		10		90	0.903134
509			20	80	0.999996
510			10	90	0.903386
511		90	10		0.903101
512	88			11	0.923564
513		10	90		0.903076
514		10		90	0.903076
515		90		10	0.903076
517	88		11		0.923564
522	77	11		11	0.968132
523	88	11			0.923564
525		11		88	0.923564
527		11		88	0.923564
528	11		88		0.923564
553		88		11	0.923564
567			90	10	0.903503

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain