SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene38021

Length: 623 nt

Origin of reads: Biogeco_1 Uagpf

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene38021 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Heat shock transcription factor (HSF) n=2 Tax=Glycine max RepID=Q00M68_SOYBN	-	-	4.0e-28	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	59%
Blast2go	heat shock transcription factor	-	-	1.1932e-28	85%

Full-Lengther Next Prediction

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
392			66	33	0.997452
393			33	66	0.997452
394	33	66			0.997452
395			33	66	0.997453
397	66		33		0.997453
400	33	33	33		0.997753
403	66	33			0.997455
404	66	33			0.997455
406	33	66			0.997452
409	66			33	0.997452
410		33	66		0.997452
411	33	66			0.997452
414	33		66		0.997452
416	66		33		0.997452
533		66		33	0.997453
592			66	33	0.997452
596	66			33	0.997452
602	66	33			0.997471
603	66	33			0.997471
606			33	33	0.997753

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain