SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene38019

Length: 1161 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene38019

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	beta-glucosidase, putative (EC:3.2.1.21); K01188 beta-glucosidase [EC:3.2.1.21]	-	-	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	glycosylhydrolase 1	-	-	69%

Source	ECs	Term	Type	e value	Identity
AutoFact	Beta-glucosidase.	EC:3.2.1.21	-	0.0	52%

Source	KEGGs	Term	Identity
AutoFact	Cyanoamino acid metabolism	00460	52%
AutoFact	Starch and sucrose metabolism	00500	52%
AutoFact	Phenylpropanoid biosynthesis	00940	52%
AutoFact	Biosynthesis of secondary metabolites	01110	52%

Source	InterPros	Term	Type	Identity
Blast2go	Glycoside hydrolase, family 1	IPR001360	-	69%
Blast2go	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	69%
Blast2go	Glycoside hydrolase, superfamily	IPR017853	-	69%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQ52

Fln msg: Separated hits, possible frame ERROR between 220 and 237, Distance to subject end: 22 aas, your sequence is shorter than subject: 386 - 407

Fln protein: MGMDVYRFSISWPRIFPKGSPRHGGVNEEGISYYNNLINELLKNGIQPFVTLFHWDLPQALEDEYGGFRSKxxxxxxxGIFSEECFRAFGDRVKYWVTVNEPLIFSYFSYDVGLHAPGRCSPGFGNCTAGNSATEPYIVAHNMLLAHSTAVKIYRHKYQGKQKGSIGIALEVDWTVPFSKSLLDQSAAQRAIDFRIGWFLNPLTSGKYPDSMKNLVGARLPRFTDEESKELKGSFDFLGFNYYSTQFAINNPNPLNPLKTDYVLDARANLSYEVNRVYIGSSEGVSAFRSYPAGLKNVINYIKHRYNNPPIYITETGYADFDNGTTPLERALNDSGRVKYHFRHLSYLIQAIREGADVRGYLVWSFLDNFEWASGYNYRFGLFYVD

Protein Length: 387

Fln nts: ATAC_-_ATGGGAATGGACGTCTATCGCTTTTCTATTTCCTGGCCACGCATATTTCCCAAGGGCTCTCCCAGACACGGAGGAGTCAATGAAGAGGGAATTTCGTATTACAATAATCTCATCAACGAGCTGCTCAAAAATGGTATACAGCCTTTTGTTACACTGTTTCACTGGGACTTGCCACAAGCTCTGGAGGACGAATACGGTGGATTTCGTAGCAAAAAxxxxxxxxxxxxxxxxxxTGGTATATTCTCAGAAGAATGCTTTCGTGCTTTTGGAGACCGTGTGAAGTACTGGGTAACTGTTAACGAACCGTTGATCTTCTCATATTTTTCTTACGATGTGGGGCTTCACGCACCGGGCCGCTGTTCGCCTGGATTTGGAAACTGCACTGCGGGAAATTCAGCGACAGAGCCTTATATTGTAGCCCATAACATGCTTCTTGCACATAGTACCGCTGTAAAAATATATAGGCATAAATACCAGGGGAAGCAGAAAGGTTCCATTGGCATAGCACTTGAAGTGGACTGGACGGTGCCATTTTCAAAGTCTTTGCTTGATCAAAGTGCTGCCCAGAGAGCAATTGACTTCAGAATAGGGTGGTTTTTGAATCCATTGACATCAGGAAAATACCCTGATTCCATGAAAAATTTAGTAGGAGCGCGGTTGCCACGGTTTACCGATGAAGAGTCAAAAGAGCTGAAAGGTTCATTCGACTTCCTCGGTTTTAACTACTATTCCACGCAATTTGCAATCAACAATCCCAACCCACTAAACCCACTGAAGACGGATTACGTTCTTGATGCCCGTGCTAATCTATCCTATGAAGTAAACAGAGTGTACATTGGATCCAGTGAAGGTGTCAGCGCTTTCAGGTCTTATCCCGCTGGATTGAAGAACGTAATAAATTATATAAAGCACCGTTATAACAACCCTCCCATATACATCACTGAGACTGGATATGCTGATTTTGACAATGGTACAACCCCGCTTGAACGAGCATTGAACGATTCTGGGCGAGTGAAGTACCATTTTCGCCATTTATCTTACTTAATTCAAGCCATTAGGGAGGGTGCGGACGTGCGAGGATACCTGGTTTGGTCGTTTCTGGACAATTTCGAGTGGGCGAGTGGATACAATTATCGATTTGGTTTATTCTATGTGGATT

Fln Alignment:

sp_v1.1_unigene38019___MGMDVYRFSISWPRIFPKGSPRHGGVNEEGISYYNNLINELLKNGIQPFVTLFHWDLPQALEDEYGGFRSKKxxxxxxGIFSEECFRAFGDRVKYWVTVNEPLIFSYFSYDVGLHAPGRCSPGFGNCTAGNSATEPYIVAHNMLLAHSTAVKIYRHKYQGKQKGSIGIALEVDWTVPFSKSLLDQSAAQRAIDFRIGWFLNPLTSGKYPDSMKNLVGARLPRFTDEESKELKGSFDFLGFNYYSTQFAINNPNPLNPLKTDYVLDARANLSYEVNRVYIGSSEGVSAFRSYPAGLKNVINYIKHRYNNPPIYITETGYADFDNGTTPLERALNDSGRVKYHFRHLSYLIQAIREGADVRGYLVWSFLDNFEWASGYNYRFGLFYVD
B8LQ52_______________MGMDVYRFSISWSRIFPKGSPRHGRVNEEGIIYYNNLINELLKNGIEPFITLFHWDMPQALEDEYGGFRSKRxxxxxxGIFAEECFRAFGDRVKYWVTVNEPLVFSLGGYDLGIHAPGRCSAGFGNCTAGNSAKEPYMVTHNMLLAHAAAVKIYRTKYQGNQKGSIGIALVVSWVVPFTKSKLDQRAARRALDFRIGWFLDPLTLGKYPDSVTSLVGARLPRFTAEEANALKGSFDFLGYNYYTTQYTISNPNPPNPLNTDYLLDARANLSYQVNGIYIGSDEGVSDFRSYPAGLRYALSCIKHRYNNPPIYITETGYVDFDNGTTPLEQALNDSKRVKYHSEHLSYLLKAIREGADVRGYLVWSLLDSFEWSSGYNYRFGLYHVD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain