SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene37968

Length: 300 nt

UniGene Fasta

>sp_v1.1_unigene37968
CACGGATCGAGCTTTGCAGCGTATTCCTTCAAGGGGAGTTTCGGGTCTTCTGGTCGCAGAGCTTTGGCTGGCCGTGGATGTTATTTCGATTTCTTTTTTTGCCGAATCATAATTTAAAAGATCTGTATTCATCAGTCTAACCAGGCAGATAAAATATGTCCCTGGAGGTCACACAAATCCTTCTTGATGCACAGTCTGTTGATGGCGCTGTTCGGAAGCATGCAGAAGAGAATCTGAGGCAGTTCCAAGATCATAAATCTGCCGGCCTTTCTCATATCCCTATCTGGTGAACTAGCTAAT

Ace file of the UniGene sp_v1.1_unigene37968

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	importin beta-1, putative	-	-	4.0e-09	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: C0PQV8

Fln msg: Overlapping hits, possible frame ERROR between 266 and 256, Distance to subject end: 826 aas, your sequence is shorter than subject: 49 - 874

Fln protein: MSLEVTQILLDAQSVDGAVRKHAEENLRQFQDHxxxxxFLISLSGELAN

Protein Length: 50

Fln nts: CACGGATCGAGCTTTGCAGCGTATTCCTTCAAGGGGAGTTTCGGGTCTTCTGGTCGCAGAGCTTTGGCTGGCCGTGGATGTTATTTCGATTTCTTTTTTTGCCGAATCATAATTTAAAAGATCTGTATTCATCAGTCTAACCAGGCAGATAAAAT_-_ATGTCCCTGGAGGTCACACAAATCCTTCTTGATGCACAGTCTGTTGATGGCGCTGTTCGGAAGCATGCAGAAGAGAATCTGAGGCAGTTCCAAGATCATxxxxxxxxxxxxxxxTTTCTCATATCCCTATCTGGTGAACTAGCTAAT

Fln Alignment:

sp_v1.1_unigene37968___MSLEVTQILLDAQSVDGAVRKHAEENLRQFQDHxxxxFLISLSGELAN
C0PQV8_______________MAMEVTQILLNAQSPDGNVRKIAEENLRQFQEQxxxxFLLSLSVELSN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain