SustainPineDB

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Assembly info
Unigenes
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SSRs
Descriptions
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene37963

Length: 355 nt

UniGene Fasta

>sp_v1.1_unigene37963
CGTCGTGACCTTGGCTGTCACTCAGGTGTCGCGTGAAGAGACAATTATAAAATCTCTTGATCCAGATGCTGCGACAACAAACCGAGATGCCCTAGCAAAAACGATATATTCACGCATGTTTGACTGGATTGTGGAGAAAATAAATAATTCAATTGGACAGGATCCTGATTCAAAGAGCCTGATTGGAGTTCTTGATATATATGGTTTTGAAAGCTTCAAGGCCAACAGTTTTGAGCAGTTTTGCATCAATTTCACAAATGAGAAGTTGCAACAGCATTTCAATCAGCATGTTTTTAAGATGGAGCAAGAAGAGTACACAAAAGAAGAAATCAATTGGAGTTACATTGAGTTTGTA

Ace file of the UniGene sp_v1.1_unigene37963

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RWS3_RICCO	-	-	86%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	83%
Blast2go	xik motor protein binding	-	-	93%

Source	GOs	Term	Type	Identity
Blast2go	root hair cell tip growth	GO:0048768	Biological Process	93%
Blast2go	peroxisome localization	GO:0060151	Biological Process	93%
Blast2go	fruit development	GO:0010154	Biological Process	93%
Blast2go	cell division	GO:0051301	Biological Process	93%
Blast2go	post-embryonic development	GO:0009791	Biological Process	93%
Blast2go	mitochondrion localization	GO:0051646	Biological Process	93%
Blast2go	trichome branching	GO:0010091	Biological Process	93%
Blast2go	Golgi localization	GO:0051645	Biological Process	93%
Blast2go	binding	GO:0005488	Molecular Function	93%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Myosin head, motor domain	IPR001609	-	0.0	93%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: tr_plants

Fln subject: A5B1K8

Fln msg: STOP codon was not found. Distance to subject end: 12 aas, your sequence is shorter than subject: 118 - 357

Fln protein: VVTLAVTQVSREETIIKSLDPDAATTNRDALAKTIYSRMFDWIVEKINNSIGQDPDSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFV

Protein Length: 119

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGGTGTCGCGTGAAGAGACAATTATAAAATCTCTTGATCCAGATGCTGCGACAACAAACCGAGATGCCCTAGCAAAAACGATATATTCACGCATGTTTGACTGGATTGTGGAGAAAATAAATAATTCAATTGGACAGGATCCTGATTCAAAGAGCCTGATTGGAGTTCTTGATATATATGGTTTTGAAAGCTTCAAGGCCAACAGTTTTGAGCAGTTTTGCATCAATTTCACAAATGAGAAGTTGCAACAGCATTTCAATCAGCATGTTTTTAAGATGGAGCAAGAAGAGTACACAAAAGAAGAAATCAATTGGAGTTACATTGAGTTTGTA

Fln Alignment:

sp_v1.1_unigene37963___VSREETIIKSLDPDAATTNRDALAKTIYSRMFDWIVEKINNSIGQDPDSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFV
A5B1K8_______________VTRDETITKWLDPDSAAVSRDALAKIVYSRLFDWIVDKINNSIGQDPDSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIDYV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain