SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene37831

Length: 700 nt

Origin of reads: Biogeco_1 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene37831

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Fructose-bisphosphate aldolase n=1 Tax=Oryza sativa Japonica Group RepID=B9EZ83_ORYSJ	-	-	5.0e-14	56%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	60%
Blast2go	atp-dependent rna	-	-	8.46315e-14	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	binding	GO:0005488	Molecular Function	8.46315e-14	77%

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
160	20		80		0.995493
164	80		20		0.995493
165			20	80	0.995493
225	40		60		1.0
258	80		20		0.995493
301	80	20			0.995493
305		60		40	1.0
353		20	80		0.995493
354			20	80	0.995493
360	20		80		0.995493
361	80	20			0.995493
368	80			20	0.995493
369	80		20		0.995493
371	80	20			0.995493
372	20			80	0.995493
373		20	80		0.995493
375		20		80	0.995493
451	25		75		0.996473
534		20		80	0.995493
547		80	20		0.995493
555		80		20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain