SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene37706

Length: 1412 nt

Origin of reads: Biogeco_1 Biogeco_2

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene37706

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RLH6_RICCO	-	-	45%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	udp-	-	-	63%

Source	InterPros	Term	Type	e value	Identity
Blast2go	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	63%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVT2

Fln msg: Distance to subject end: 72 aas, your sequence is shorter than subject: 424 - 489

Fln protein: MLKLEWTVMAANAERRPHVLVFPFPAQGHMIPLLDLTHTLACDGLSLTVLTTPQNQPLLDPLLHKASTEGLSVQPLVIPLPPTKGLPPGCENLAQIPLHLVLLLMASFKELAHPIEDWFQQQKDSDYGFGPPVCMISDFFLGWTYDTATKLGIPRIVFHPCGAFDALLHYSLWKYMPGILESDDDAVHFLEAPHPVSFAKHQISSLGLLYKKSDPVSEFIRYSMNLNVKSWGNIINTFYDLEAVYMDQLHRVSGSPVWSVGPLFPPAMFDPKLRRTMIERGKPSSINDSLLQQWLDSRGEKSVIYICFGSQACLSNKQIEEMAAGLEATEESFIWVMRDLPSGLPADEYGVLPQGFEERMEGRGLIIRGWAPQLLILSHPSVGGFLTHCGWNSTLESITMGVPLITWPLAADQYYNARLLVESL

Protein Length: 425

Fln nts: ATGGGGACGAAAAACACGTCCGAACATGGCAGCAGGTAGGCGCTAAGTATTTAGACAACCTAACAATTTGATAATTAAGTTTGGTGACGTCGACCTGTCCCTTTGTATCCAAATACTTATTTGAAACCCCAAATTCAA_-_ATGTTGAAACTGGAGTGGACTGTAATGGCAGCAAACGCAGAGAGGAGGCCTCACGTTCTGGTCTTTCCATTCCCAGCACAGGGCCATATGATTCCTCTGCTCGACCTCACCCATACCCTCGCTTGTGATGGCCTCTCCCTAACAGTCCTCACAACTCCTCAGAACCAACCCCTGTTGGATCCTCTTTTGCACAAAGCCTCTACAGAGGGTCTTTCTGTTCAACCCCTTGTCATTCCACTCCCTCCCACAAAAGGACTTCCTCCTGGATGTGAAAACCTGGCTCAGATTCCTTTACATCTGGTCTTACTCTTGATGGCTTCGTTCAAGGAGCTTGCTCATCCAATAGAAGACTGGTTCCAACAGCAGAAGGACTCAGATTATGGTTTCGGCCCTCCTGTTTGCATGATCAGTGATTTCTTCCTCGGATGGACTTACGATACCGCTACCAAGCTCGGGATACCTAGAATAGTATTCCATCCCTGTGGTGCATTTGATGCTCTTCTCCACTATTCTCTGTGGAAATACATGCCTGGAATACTGGAGTCTGATGATGATGCAGTCCATTTTCTGGAAGCCCCTCATCCTGTTAGTTTTGCTAAGCACCAAATCTCTTCCCTTGGACTACTGTACAAGAAATCCGACCCTGTATCTGAATTCATCAGATATAGCATGAATTTGAATGTGAAAAGCTGGGGTAATATCATCAACACATTCTATGATCTAGAAGCTGTTTATATGGACCAGCTGCACAGAGTTTCTGGCAGCCCTGTTTGGTCTGTGGGTCCTCTGTTTCCTCCTGCTATGTTCGATCCGAAGCTGAGAAGAACGATGATTGAAAGAGGCAAACCCTCTTCAATCAATGATTCGCTATTGCAGCAATGGCTGGACTCTAGGGGAGAAAAGTCTGTTATATATATTTGCTTTGGTAGCCAGGCCTGCCTTTCAAATAAACAAATCGAGGAGATGGCAGCAGGGCTGGAGGCAACCGAAGAGTCTTTCATATGGGTCATGAGAGATCTGCCTAGTGGTCTGCCTGCTGATGAATATGGTGTGCTTCCCCAAGGTTTTGAAGAGAGAATGGAGGGAAGAGGTCTGATAATTAGAGGTTGGGCACCTCAGCTCTTGATCCTTTCACACCCTTCTGTTGGGGGTTTTCTTACCCACTGTGGGTGGAATTCTACCCTGGAGAGCATCACAATGGGAGTGCCATTGATAACATGGCCCCTGGCCGCAGATCAATACTATAATGCTAGGTTATTGGTTGAATCTCTTAA

Fln Alignment:

sp_v1.1_unigene37706___MAANAERRPHVLVFPFPAQGHMIPLLDLTHTLACDGLSLTVLTTPQNQPLLDPLLHKASTEGLSVQPLVIPLPPTKGLPPGCENLAQIPLHLVLLLMASFKELAHPIEDWFQQQKDSDYGFGPPVCMISDFFLGWTYDTATKLGIPRIVFHPCGAFDALLHYSLWKYMPGILESDDDAVHFLEAPHPVSFAKHQISSLGLLYKKSDPVSEFIRYSMNLNVKSWGNIINTFYDLEAVYMDQLHRVSGSPVWSVGPLFPPAMFDPKLRRTMIERGKPSSINDSLLQQWLDSRGEKSVIYICFGSQACLSNKQIEEMAAGLEATEESFIWVMRDLPSGLPADEYGVLPQGFEERMEGRGLIIRGWAPQLLILSHPSVGGFLTHCGWNSTLESITMGVPLITWPLAADQYYNARLLVESL
A9NVT2_______________MAANIERRPHVLVFPFPAQGHMIPLLDLTHTLACHGLSLTVLTTPQNQSLLDPLLHKASTEGLSIQALIIPLPPTEGLPPGCENLAQIPLHLFFLLMHSFKELAHPIEHWFQQQKNSDYGFGPPVCMISDFFLGWTYDTATKLGIPRIVFHPCGAFDAFLHYSLWKYMPGLMESDDDKVHFPELPHPVSFAKHQISSLGQLYKRSDPVSEFIRYSMNLNVKSWGNLINTFNDLEAVYMDHLHRVSGRPVWSVGPLFPPAVFDPKQRRTMIERGKPTTINESVFLQWLDSRGEKSVIYICFGSQACLSNKQVEEMAAGLEATEESFIWVIRDPPSGMPADEYGVLPQGFEDRMEGRGLIIRGWAPQLLILSHPSVGGFLSHCGWNSTLESITLGVPLITWPMAADQYYNARLLVEYL

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
1084		33		66	0.997452
1142		33	66		0.999978
1186		85		14	0.993533
1197	16		83		0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain