SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene37440

Length: 950 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene37440

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana] gb\|AAK62413.1\|AF386968_1 Unknown protein [Arabidopsis thaliana] gb\|AAM10006.1\| unknown protein [Arabidopsis thaliana]	-	-	58%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	69%
Blast2go	phospholipid glycerol acyltransferase family protein	-	-	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Tafazzin	IPR000872	-	0.0	77%
Blast2go	Phospholipid/glycerol acyltransferase	IPR002123	-	0.0	77%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: A5AD21

Fln msg: Separated hits, possible frame ERROR between 212 and 215, Distance to subject end: 95 aas, your sequence is shorter than subject: 316 - 459

Fln protein: VLLMPSQMYLQLSLDSKSNQDQEIVDAGDSSMVRMLQAVAVPLIGNVCRAFLHGLNYTEVYGAEKLQEAxxNRPKGQPLITVSNHVASVDDPLVISSVLPPRLLLDAKSIRWTLCATDRCFTNPVTSAFFHCVKVLPVARGDGIFQKGMDMALSKLNRGDWVHIFPEGSRSRDGGKTIGTAKRGIGRLVLDAERMPLVVPFVHSGMQEVMPIGSQFPHVSKKVVVLVGDPIKVDDLFMVSKEQGFSEGKLYDAISLRVGERLKELKIELDDLVYQQSLQNRNANNLHTIEMVNDSSQFVDWETNNLLSQKPLAEYG

Protein Length: 317

Fln nts: CCGTGCTGCTTATGCCGAGCCAAATGTACCTCCAGCTTAGCCTTGACTCAAAATCGAATCAAGATCAGGAGATAGTTGATGCTGGAGACTCTAGTATGGTCCGCATGCTCCAAGCAGTTGCTGTTCCTTTGATAGGAAATGTTTGTCGTGCCTTTCTGCATGGTCTTAACTATACTGAGGTTTATGGTGCTGAAAAGCTTCAAGAGGCAATxxxAAATAGACCTAAAGGGCAGCCACTTATTACGGTCAGCAATCATGTAGCATCTGTGGATGATCCCTTGGTTATATCTTCAGTTCTCCCACCGAGGTTGTTGTTAGATGCAAAAAGTATAAGGTGGACACTTTGTGCCACAGACAGGTGTTTCACCAATCCAGTGACATCTGCATTCTTCCATTGTGTGAAAGTGTTACCTGTTGCTCGTGGAGATGGGATTTTTCAAAAGGGTATGGACATGGCCTTATCAAAGCTGAACCGAGGAGATTGGGTGCATATTTTTCCAGAAGGTAGTCGTTCTCGTGATGGAGGCAAGACGATTGGAACTGCTAAGAGAGGAATTGGAAGGTTGGTGCTTGATGCTGAGAGGATGCCTTTGGTGGTTCCATTTGTGCATTCTGGCATGCAGGAAGTGATGCCTATAGGAAGTCAGTTTCCACATGTTAGCAAAAAGGTTGTGGTGCTGGTGGGGGATCCAATCAAAGTTGATGATTTATTTATGGTGAGCAAGGAGCAAGGGTTTTCTGAAGGGAAGCTTTACGATGCTATATCATTGCGTGTTGGGGAAAGGCTAAAAGAACTTAAAATAGAATTAGATGATTTGGTTTATCAACAATCCCTGCAAAACAGAAATGCAAACAATCTACACACAATTGAAATGGTGAATGACAGTTCTCAGTTTGTTGATTGGGAAACAAACAATTTGCTAAGTCAAAAACCACTGGCAGAATATGGAG

Fln Alignment:

sp_v1.1_unigene37440___DSSMVRMLQAVAVPLIGNVCRAFLHGLNYTEVYGAEKLQEAIxNRPKGQPLITVSNHVASVDDPLVISSVLPPRLLLDAKSIRWTLCATDRCFTNPVTSAFFHCVKVLPVARGDGIFQKGMDMALSKLNRGDWVHIFPEGSRSRDGGKTIGTAKRGIGRLVLDAERMPLVVPFVHSGMQEVMPIGSQFPHVSKKVVVLVGDPIKVDDLFMVSKEQGFSEGKLYDAISLRVGERLKELKIELDDLVYQQSLQNRNANNLHTIEMVNDSSQFVDWET
A5AD21_______________DSVFVRMLQALAVPVIGNVCYVFMHGLNRVQVYGAEKLHEVLxHRPENKPLITVSNHVASVDDPLVIASLLPPSVLLDARSLRWTMCATDRCFKNPVTSAFFQCVKVLPVSRGEGIYQKGMDMAVSKLNSGGWVHIFPEGSRSRDGGKTMGSAKRGVGRLVLDADNTPIVVPFVHTGMQEVMPIGANFPRIGQAVTVLIGDPIHFDDLLNEQQTQHMSRGKLYDAVSSRVSHRLQELKVQVDKLALEHSIQLQN-HDMQTTERAAGILHQVDWES

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
627		80	20		0.995493
868		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain