SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene36989

Length: 400 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene36989
TGGCGTTGGCAACTAGCCAAAGCTCATGTTTGTGCCAACGATGCTGGAGTTCACCAGCTAGTGAATCATTGGTAAAGTGTTTTTGTTGATTTAAATAAGTTTATTTTCATATAACCTCAGGGTAGTGGGGCTTAATGTAATGCAATGGTTGATTTTATGAACTCAAGGGTCTAAATCACTTTTGTAAGCCAAATCCAGTCAACTGAAAATGGAAGCCTACGCAAATCACTGATCAGATGCCTTATTAACAGGTTGCGGACGCATGCTGCCATGGAGCCCTATGTTATTTCAGCACATAGGCATCTAAGTGCTATGCACCCCATATTCAAATTGCTTCAACCACACATGCGCTACACCCTGGAAATCAATGCATTAGCTCGACAGAGTTGATTAATGCAGA

Ace file of the UniGene sp_v1.1_unigene36989

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Lipoxygenase n=1 Tax=Oryza sativa Japonica Group RepID=B9F5I2_ORYSJ	-	-	6.0e-16	80%
FL-Next	sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Blast2go	at1g17420 f1l3_1	-	-	1.08729e-15	90%

Source	ECs	Term	Type	e value	Identity
Blast2go	Lipoxygenase.	EC:1.13.11.12	-	1.08729e-15	90%

Source	KEGGs	Term	e value	Identity
Blast2go	Linoleic acid metabolism	00591	1.08729e-15	90%
Blast2go	alpha-Linolenic acid metabolism	00592	1.08729e-15	90%
Blast2go	Biosynthesis of plant hormones	01070	1.08729e-15	90%
Blast2go	Metabolic pathways	01100	1.08729e-15	90%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to jasmonic acid stimulus	GO:0009753	Biological Process	1.08729e-15	90%
Blast2go	response to ozone	GO:0010193	Biological Process	1.08729e-15	90%
Blast2go	fatty acid biosynthetic process	GO:0006633	Biological Process	1.08729e-15	90%
Blast2go	response to fungus	GO:0009620	Biological Process	1.08729e-15	90%
Blast2go	response to wounding	GO:0009611	Biological Process	1.08729e-15	90%
Blast2go	response to bacterium	GO:0009617	Biological Process	1.08729e-15	90%
Blast2go	response to high light intensity	GO:0009644	Biological Process	1.08729e-15	90%
Blast2go	lipoxygenase activity	GO:0016165	Molecular Function	1.08729e-15	90%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PT31

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 290 aas, your sequence is shorter than subject: 130 - 924

Fln protein: WRWQLAKAHVCANDAGVHQLVNHW*SVFVDLNKFIFI*PQGSGA*CNAMVDFMNSRV*ITFVSQIQSTENGSLRKSLIRCLINRLRTHAAMEPYVISAHRHLSAMHPIFKLLQPHMRYTLEINALARQS*

Protein Length: 131

Fln nts: TGGCGTTGGCAACTAGCCAAAGCTCATGTTTGTGCCAACGATGCTGGAGTTCACCAGCTAGTGAATCATTGGTAAAGTGTTTTTGTTGATTTAAATAAGTTTATTTTCATATAACCTCAGGGTAGTGGGGCTTAATGTAATGCAATGGTTGATTTTATGAACTCAAGGGTCTAAATCACTTTTGTAAGCCAAATCCAGTCAACTGAAAATGGAAGCCTACGCAAATCACTGATCAGATGCCTTATTAACAGGTTGCGGACGCATGCTGCCATGGAGCCCTATGTTATTTCAGCACATAGGCATCTAAGTGCTATGCACCCCATATTCAAATTGCTTCAACCACACATGCGCTACACCCTGGAAATCAATGCATTAGCTCGACAGAGTTGATTAATGCAGA

Fln Alignment:

sp_v1.1_unigene36989___WRWQLAKAHVCANDAGVHQLVNHW
C0PT31_______________WLWKLAKSHVCANDAGYHQLVNHW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain