SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene36869

Length: 872 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene36869 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYB9_RICCO	-	-	4.0e-11	62%
FL-Next	tr=Protein binding protein, putative; Ricinus communis (Castor bean).	-	-	0.0	62%
Blast2go	protein binding	-	-	7.82093e-11	72%

Full-Lengther Next Prediction

SNPs (tot: 36)

Position	A %	C %	G %	T %	Probability
163	50		50		1.0
399			14	85	0.993533
401			14	85	0.993533
403		14		85	0.993533
404	14		85		0.993533
406		14		85	0.993533
408	14	85			0.993533
409	12			87	0.992556
412	87			12	0.992557
413		12		87	0.992557
415	87	12			0.992557
416			12	87	0.992556
419		87	12		0.992558
543		11	88		0.991528
544		11		88	0.991528
547			88	11	0.991528
550			87	12	0.992554
559	12		87		0.992554
563	87			12	0.992554
564		12		87	0.992554
569	87		12		0.992554
572	85		14		0.993533
573	14	85			0.993533
574			14	85	0.993533
577	14		85		0.993533
578	85	14			0.993533
579	14		85		0.993533
582		14	85		0.993533
583	14		85		0.993533
587	85			14	0.993533
588		14		85	0.993533
590		14		85	0.993533
592	14	85			0.993533
593	85	14			0.993533
740		11		88	0.999937
819	14	85			0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain