SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene36840

Length: 262 nt

Origin of reads: Biogeco_1

UniGene Fasta

>sp_v1.1_unigene36840
TCTTAGTGGGTTTAATGCTGATGTGGGATGGCCATTTTATGCAGTCATGACAACAGCCGCTGGGCATCTGGCATGGCAAATTTTGACTGTGGACATCTCATCCCGTGCTGACTGTAATAGGAAGTTTGTCTCCAATAAGTGGTTTGGAGCTCTTGTATTCAGTGGAGTTTTATTGGGAAAGTTGACGACTGCGTGAATGCATTGGATAAATTGTTGAAACCATCATCATCCATTTACATAAGAATAGACTTAAAATTGTTTG

Ace file of the UniGene sp_v1.1_unigene36840

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	para-hydroxybenzoate--polyprenyltransferase; K06125 4-hydroxybenzoate hexaprenyltransferase [EC:2.5.1.-]	-	-	7.0e-21	68%
FL-Next	sp=4-hydroxybenzoate polyprenyltransferase, mitochondrial; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	66%
Blast2go	protein	-	-	4.57472e-22	82%

Source	ECs	Term	Type	e value	Identity
Blast2go	4-hydroxybenzoate polyprenyltransferase.	EC:2.5.1.39	-	4.57472e-22	82%

Source	KEGGs	Term	e value	Identity
Blast2go	Ubiquinone and other terpenoid-quinone biosynthesis	00130	4.57472e-22	82%
Blast2go	Metabolic pathways	01100	4.57472e-22	82%
Blast2go	Biosynthesis of secondary metabolites	01110	4.57472e-22	82%

Source	ECs	Term	Type	e value	Identity
AutoFact	Transferases, Transferring alkyl or aryl groups, other than methyl groups, Transferring alkyl or aryl groups, other than methyl groups.	EC:2.5.1.-	-	7.0e-21	68%

Source	KEGGs	Term	e value	Identity
AutoFact	Ubiquinone and other terpenoid-quinone biosynthesis	00130	7.0e-21	68%
AutoFact	Cysteine and methionine metabolism	00270	7.0e-21	68%
AutoFact	Tryptophan metabolism	00380	7.0e-21	68%
AutoFact	Porphyrin and chlorophyll metabolism	00860	7.0e-21	68%
AutoFact	Terpenoid backbone biosynthesis	00900	7.0e-21	68%
AutoFact	Carotenoid biosynthesis	00906	7.0e-21	68%
AutoFact	Biosynthesis of terpenoids and steroids	01062	7.0e-21	68%
AutoFact	Metabolic pathways	01100	7.0e-21	68%
AutoFact	Biosynthesis of secondary metabolites	01110	7.0e-21	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	embryo development	GO:0009790	Biological Process	4.57472e-22	82%
Blast2go	ubiquinone biosynthetic process	GO:0006744	Biological Process	4.57472e-22	82%
Blast2go	4-hydroxybenzoate nonaprenyltransferase activity	GO:0047293	Molecular Function	4.57472e-22	82%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: Q93YP7

Fln msg: your sequence is shorter than subject: 65 - 407

Fln protein: LSGFNADVGWPFYAVMTTAAGHLAWQILTVDISSRADCNRKFVSNKWFGALVFSGVLLGKLTTA*

Protein Length: 66

Fln nts: TCTTAGTGGGTTTAATGCTGATGTGGGATGGCCATTTTATGCAGTCATGACAACAGCCGCTGGGCATCTGGCATGGCAAATTTTGACTGTGGACATCTCATCCCGTGCTGACTGTAATAGGAAGTTTGTCTCCAATAAGTGGTTTGGAGCTCTTGTATTCAGTGGAGTTTTATTGGGAAAGTTGACGACTGCGTGA___ATGCATTGGATAAATTGTTGAAACCATCATCATCCATTTACATAAGAATAGACTTAAAATTGTTTG

Fln Alignment:

sp_v1.1_unigene36840___LSGFNADVGWPFYAVMTTAAGHLAWQILTVDISSRADCNRKFVSNKWFGALVFSGVLLGK
Q93YP7_______________LSGFSADLGWQYYASLAAASGQLGWQIGTADLSSGADCSRKFVSNKWFGAIIFSGVVLGR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain