SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene36714

Length: 540 nt

UniGene Fasta

>sp_v1.1_unigene36714
CGGACCAGAGCTGGAATATTATTTTTATGCGCAGCAGCGTCAAATCCTCAAAATCATTGTTCGAGAAGCACCGTTAGATTCCACCAAATCCATTTCAGTTTCAATACATTGCCATGGCGATTTCTTTGATCCGAGTTGTCAAGTCGCGTGTTCGATTCTTTCGCAGCACTATTCTGTCGTCTTACTCAGGAGCAGGAACCAGGCTTTTCTCAAATGCCAGCAGTCCCCAGCTAGAGAGAGTCGGATTCATTGGACTTGGAAATATGGGGTCCCATATGGCAAATAATCTTCTCAAAGCTGGATACAATCTCATTGTGCACGACAGGAACCCTGTGGTCTTGGAAAAGTTTGTAAAGAAGGGAGTATCTACTGCAAACTCACCTTTGGATGTGGCAGAAGCAAGTGATGCTGTAATAACCATGCTACCTTCATCACCAGAACATGTAGGTTATGGATGTGTACATGGGATCAGAGGGTTTGTTGAGCAAAGGAAATACTGTCAAACCATGGCTTCTGGTAGATACATCAACAGTGGATCCC

Ace file of the UniGene sp_v1.1_unigene36714

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	3-hydroxyisobutyrate dehydrogenase n=1 Tax=Zea mays RepID=B6SHU3_MAIZE	-	-	3.0e-25	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	37%
Blast2go	3-hydroxyisobutyrate dehydrogenase	-	-	4.56258e-25	70%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	4.56258e-25	70%

Source	InterPros	Term	Type	e value	Identity
Blast2go	3-hydroxyisobutyrate dehydrogenase-related, conserved site	IPR002204	-	4.56258e-25	70%
Blast2go	6-phosphogluconate dehydrogenase, NADP-binding	IPR006115	-	4.56258e-25	70%
Blast2go	3-hydroxyacid dehydrogenase/reductase	IPR015815	-	4.56258e-25	70%
Blast2go	NAD(P)-binding domain	IPR016040	-	4.56258e-25	70%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9P0U0

Fln msg: Distance to subject end: 80 aas, your sequence is shorter than subject: 142 - 180

Fln protein: MAISLIRVVKSRVRFFRSTILSSYSGAGTRLFSNASSPQLERVGFIGLGNMGSHMANNLLKAGYNLIVHDRNPVVLEKFVKKGVSTANSPLDVAEASDAVITMLPSSPEHVGYGCVHGIRGFVEQRKYCQTMASGRYINSGS

Protein Length: 143

Fln nts: CGGACCAGAGCTGGAATATTATTTTTATGCGCAGCAGCGTCAAATCCTCAAAATCATTGTTCGAGAAGCACCGTTAGATTCCACCAAATCCATTTCAGTTTCAATACATTGCC_-_ATGGCGATTTCTTTGATCCGAGTTGTCAAGTCGCGTGTTCGATTCTTTCGCAGCACTATTCTGTCGTCTTACTCAGGAGCAGGAACCAGGCTTTTCTCAAATGCCAGCAGTCCCCAGCTAGAGAGAGTCGGATTCATTGGACTTGGAAATATGGGGTCCCATATGGCAAATAATCTTCTCAAAGCTGGATACAATCTCATTGTGCACGACAGGAACCCTGTGGTCTTGGAAAAGTTTGTAAAGAAGGGAGTATCTACTGCAAACTCACCTTTGGATGTGGCAGAAGCAAGTGATGCTGTAATAACCATGCTACCTTCATCACCAGAACATGTAGGTTATGGATGTGTACATGGGATCAGAGGGTTTGTTGAGCAAAGGAAATACTGTCAAACCATGGCTTCTGGTAGATACATCAACAGTGGATCCC

Fln Alignment:

sp_v1.1_unigene36714___VGFIGLGNMGSHMANNLLKAGYNLIVHDRNPVVLEKFVKKGVSTANSPLDVAEASDAVITMLPSSPEHVGYGCVHGIRGFVEQ
A9P0U0_______________VGFLGLGIMGKAMAVNLLRNGFKVTVWNRTLSRCEELVEQGASMGSTPAEVVKKCKYIIAMLSDPP--AALSVVFGKDGVLEQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain