SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene36700

Length: 807 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene36700

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE	-	-	6.0e-38	98%
FL-Next	sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	100%
Blast2go	histone h4	-	-	5.01966e-38	100%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	5.01966e-38	100%
Blast2go	chromosome organization	GO:0051276	Biological Process	5.01966e-38	100%
Blast2go	binding	GO:0005488	Molecular Function	5.01966e-38	100%
Blast2go	nucleolus	GO:0005730	Cellular Component	5.01966e-38	100%
Blast2go	vacuole	GO:0005773	Cellular Component	5.01966e-38	100%
Blast2go	plasma membrane	GO:0005886	Cellular Component	5.01966e-38	100%
Blast2go	chromosome	GO:0005694	Cellular Component	5.01966e-38	100%
Blast2go	chloroplast	GO:0009507	Cellular Component	5.01966e-38	100%
Blast2go	thylakoid	GO:0009579	Cellular Component	5.01966e-38	100%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Histone H4	IPR001951	-	5.01966e-38	100%
Blast2go	Histone core	IPR007125	-	5.01966e-38	100%
Blast2go	Histone-fold	IPR009072	-	5.01966e-38	100%
Blast2go	Histone H4, conserved site	IPR019809	-	5.01966e-38	100%

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
559			80	20	0.995493
560		80	20		0.995493
562			20	80	0.995493
650		25	75		0.996473
674	20	80			0.995493
700		16		83	0.994512
785			66	33	0.997454

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain