SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene36506

Length: 302 nt

Origin of reads: Biogeco_2

UniGene Fasta

>sp_v1.1_unigene36506
ATGGGGACCGATAGATATTCTCTTCCTTTTTTCTTCAGTCTGTCGTTAGAATGGCGAGAATACAAAGGTTAATTGAAGGAGGTCCCTTGGAGGGCATCGCTGATTTTTCCTTTGCAGGTATCATTCTGCTTCTAATAATTCATTATGCTACAAGGTTATTATTCCAGAAGAGTGTTTCCATGCCTCCAGGGCCTCTGGCCTGGCCAATTATTGGGCACATCCATCTGCTGGACGCGAATCGACCTCTTCATCAAACGCTTTACGATCTCGCTAAGCGCTATGGCCACATCATTCTCCTCCAA

Ace file of the UniGene sp_v1.1_unigene36506

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	similar to cytochrome P450, family 2, subfamily K, polypeptide 6	-	-	5.0e-07	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	65%
Blast2go	unknown [Picea sitchensis]	-	-	3.24545e-20	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome P450	IPR001128	-	3.24545e-20	71%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQI3

Fln msg: Distance to subject end: 342 aas, your sequence is shorter than subject: 84 - 414

Fln protein: MARIQRLIEGGPLEGIADFSFAGIILLLIIHYATRLLFQKSVSMPPGPLAWPIIGHIHLLDANRPLHQTLYDLAKRYGHIILLQ

Protein Length: 85

Fln nts: ATGGGGACCGATAGATATTCTCTTCCTTTTTTCTTCAGTCTGTCGTTAGA_-_ATGGCGAGAATACAAAGGTTAATTGAAGGAGGTCCCTTGGAGGGCATCGCTGATTTTTCCTTTGCAGGTATCATTCTGCTTCTAATAATTCATTATGCTACAAGGTTATTATTCCAGAAGAGTGTTTCCATGCCTCCAGGGCCTCTGGCCTGGCCAATTATTGGGCACATCCATCTGCTGGACGCGAATCGACCTCTTCATCAAACGCTTTACGATCTCGCTAAGCGCTATGGCCACATCATTCTCCTCCAA

Fln Alignment:

sp_v1.1_unigene36506___LEGIADFSFAGIILLLIIHYATRLLFQKSVSMPPGPLAWPIIGHIHLLDANRPLHQTLYDLAKRYGHIILLQ
B8LQI3_______________MTAMADLAFAGITLLLIIHYVKWLSSHKRGCKPPGPLAWPIIGHIHLLNSNRPLHQTLCDLVRRYGHVMLLK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain