SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene35907

Length: 1368 nt

Origin of reads: Biogeco_1 Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene35907 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucosyltransferase, putative (EC:2.4.1.115)	-	-	1.4013e-45	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	50%
Blast2go	udp rhamnose:anthocyanidin-3-glucoside rhamnosyltransferase	-	-	0.0	56%

Source	InterPros	Term	Type	e value	Identity
Blast2go	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	56%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LR43

Fln msg: Distance to subject end: 137 aas, your sequence is shorter than subject: 372 - 491

Fln protein: MPLPNYWSAAILSLSFSSMEFSSSSCSSANNNGDGSGQQLHVMMFPWLAHGHISPFVQLSATLAQLAIKVSFVSTPLNIANLKSFFARHHNVQPLELRLPPVEGLPAGIESTKDLPIHLAPLFDKALDGLEEPLEQLLRQNCPDCILFDFVQWWVPRAAEKMGIPTIFFATFGAAFAGYGLSPAWRCDGGEISAEALTKPPPGYPSNAVSWELHEAHSVLGLYRIHPPNDTSYHERGLRCFDGCRAIAVRTCNEIEGKFIQYLQSVTGKPVFPVGPLLADLSSAVNSEEEWGCIKWLEAHAVASVVYVSFGSQVFMSEEQTHEVALGLEALRCPDENNSGFGFLKGSNSVSEKGLWWGLGSAEADFVACFDG

Protein Length: 373

Fln nts: CATAAATAAAATTAAAAAAGGGTTTGTCATTTACACACCCCATCTGATTTTTATCAAATCTCAACAACCTATGAAGAAAATTACAATTAAAATTAACTTCATAAACAAAAGAAAAGTAGAAAAAATAAAATTGCTATTAAAAACAAGCCTAGCAGAAAAGTAGAAAAAATAAAATTGCTATTAAAAACAAGCCTAGCAATAATCATAAAGGTTGACGTACTCTGTTGGACATAATAAAGAGTGGTGTTTTT_-_ATGCCTTTGCCCAACTACTGGTCTGCTGCAATTCTAAGTCTGTCTTTCTCATCGATGGAATTCTCATCCTCATCGTGTTCTTCTGCTAACAACAATGGCGATGGCAGTGGCCAGCAGCTTCATGTAATGATGTTTCCATGGCTTGCTCACGGCCATATCTCGCCCTTCGTACAACTTTCAGCtACACTCGCACAGCTCGCCATTAAaGTCTCCTTCGTCTCCACTCCTCTCAACATTGCCAACCTcAAATCCTTCTTCGCCCGTCATCACAATGTCCAGCCGCTGGAATTACGGTTACCGCCAGTGGAAGGGCTGCCCGCAGGAATAGAAAGCACCAAAGATCTGCCAATCCATTTAGCGCCTCTCTTCGACAAAGCCCTGGACGGACTGGAAGAACCCCTTGAACAACTTCTCCGCCAGAATTGTCCGGACTGCATCCTCTTCGACTTCGTGCAATGGTGGGTTCCCCGGGCTGCCGAGAAGATGGGGATACCCACCATTTTCTTTGCCACTTTTGGCGCGGCTTTCGCTGGCTATGGCCTGTCTCCAGCTTGGCGATGCGACGGGGGAGAAATCTCGGCCGAGGCCCTCACGAAACCCCCTCCGGGTTATCCATCGAATGCCGTATCATGGGAACTCCACGAGGCGCACAGCGTACTGGGCCTCTACCGAATCCACCCGCCAAACGATACCAGTTATCATGAGCGCGGGCTCAGATGTTTTGACGGCTGCCGCGCCATTGCCGTCAGAACATGCAATGAAATTGAGGGGAAATTCATACAGTATTTGCAGAGTGTGACGGGCAAACCGGTATTCCCCGTCGGCCCCCTACTTGCCGATCTTAGCTCAGCCGTAAATTCTGAGGAAGAATGGGGTTGCATTAAATGGCTAGAAGCTCACGCGGTAGCTTCGGTCGTTTATGTATCGTTTGGCAGCCAAGTTTTTATGAGCGAAGAGCAGACCCACGAAGTGGCTCTGGGTTTGGAGGCACTGCGTTGCCCCGACGAAAACAACTCGGGGTTTGGCTTCCTCAAGGGTTCCAACAGCGTATCGGAAAAGGGCTTGTGGTGGGGATTGGGTTCCGCAGAGGCAGATTTTGTCGCATGCTTCGACGGGA

Fln Alignment:

sp_v1.1_unigene35907___NNNGDGSGQQLHVMMFPWLAHGHISPFVQLSATLAQLAIKVSFVSTPLNIANLKSFFARHHN-----VQPLELRLPPVEGLPAGIESTKDLPIHLAPLFDKALDGLEEPLEQLLRQNCPDCILFDFVQWWVPRAAEKMGIPTIXXXXXXXXXXGYGLSPAWRCDGGEISAEALTKPPPGYPSNAVSWELHEAHSVLGLYRIHPPNDTSYH---ERGLRCFDGCRAIAVRTCNEIEGKFIQYLQSVTGKPVFPVGPLLADLSSAVNSEEEWGCIKWLEAHAVASVVYVSFGSQVFMSEEQTHEVALGLEA
B8LR43_______________NNSNERSSKKLHVLMFPWLARGHLSTYAQLANRLADRGINVSFLTTPLNVPKMEPLFIMANRNSPGKVQVVELPLPAVEGFPPGIECTADTPAHLWPLLLRAVHLLEEPFESLLRRLAPDVVVFDLVQYWTPRVATKLGIPTVFFLIFGAAYSSYQLSPPNAEYGEEITAEDLMVPPPGYPSSTISWRPFEAQFTFKIF--HTRDDTDGMRGIDRLVKCIDGCEAIAIKSCYEFEGKFIEYFQQVTGKPVIPVGPLLQSNAGPLDSE----CLKWLGRQAASSVVYACFGTECFLSNEEIREVALGLEA

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
429	33		66		0.997453
512	66		33		0.997452
521		25	75		0.99649
641		50	50		1.0
875	33		66		1.0
914		33		66	1.0
921	25		75		0.996473
938	33		66		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain