SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene35889

Length: 726 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene35889 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	TIP1; TIP1 (TIP GROWTH DEFECTIVE 1); S-acyltransferase/ acyl binding	-	-	3.0e-32	84%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	64%
Blast2go	protein	-	-	7.85722e-35	85%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell tip growth	GO:0009932	Biological Process	7.85722e-35	85%
Blast2go	S-acyltransferase activity	GO:0016417	Molecular Function	7.85722e-35	85%
Blast2go	acyl binding	GO:0000035	Molecular Function	7.85722e-35	85%

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
410		33		66	0.997452
660			75	25	0.996478
672	66	33			0.997476
673	66	33			0.997476
677			33	66	0.997461
680	33	66			0.997461
681		33	66		0.997461
685			33	66	0.997461

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain