SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene35817

Length: 850 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene35817

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	zinc finger (C3HC4-type RING finger) family protein	-	-	6.0e-12	39%
FL-Next	sp=RING-H2 finger protein ATL74; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	39%
Blast2go	protein	-	-	0.0	60%

Source	InterPros	Term	Type	Identity
Blast2go	Zinc finger, RING-type	IPR001841	-	60%
Blast2go	Zinc finger, RING/FYVE/PHD-type	IPR013083	-	60%
Blast2go	Zinc finger, C3HC4 RING-type	IPR018957	-	60%

Full-Lengther Next Prediction

SNPs (tot: 63)

Position	A %	C %	G %	T %	Probability
272		40	60		1.0
274		66	33		1.0
281	83		16		0.994513
288	16		83		0.994512
306		42	57		1.0
308		12		75	0.975346
314		12	87		0.992557
315		12	87		0.992557
316	85			14	0.993533
320	85	14			0.993533
324	87	12			0.99256
326	85	14			0.993533
344		12		87	0.992559
345		12	87		0.992554
350			57	42	1.0
356		11		88	0.923695
357	88		11		0.923695
361	88		11		0.92373
365		11	88		0.92373
366	88	11			0.92373
370			87	12	0.992554
374			88	11	0.924009
377		81	18		0.999994
380		18	81		0.999994
382			80	20	0.999996
384		18		81	0.999994
385		18	81		0.999994
387			83	16	0.999991
391		18		81	0.999994
393		81	18		0.999994
396	16	83			0.999991
397	81	18			0.999994
399	81	18			0.999994
400	18	81			0.999994
460	14			71	0.984337
471	33		66		1.0
473	83	16			0.994512
474	14	71	14		0.984377
485		85	14		0.993533
512		83		16	0.994512
513	16	83			0.994512
518		28	71		1.0
530		80		20	0.995493
557		16		83	0.994512
563			83	16	0.994512
580		16		83	0.994512
586		71	28		1.0
587	16		83		0.994512
600		16		83	0.994512
603	16		83		0.994512
649		60		40	1.0
652	75		25		0.996473
663		80	20		0.995505
688	33	66			0.997452
692		66		33	0.997452
705	50		50		1.0
715	50		25	25	0.995556
719	33	66			0.997452
723			66	33	0.997452
727	33	66			0.997452
734	50		50		1.0
742	25		75		0.996473
743		75		25	0.996477

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain