SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene35789

Length: 1588 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene35789

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	44%
Blast2go	protein	-	-	76%

Source	GOs	Term	Type	Identity
Blast2go	regulation of unidimensional cell growth	GO:0051510	Biological Process	76%
Blast2go	post-embryonic development	GO:0009791	Biological Process	76%
Blast2go	brassinosteroid mediated signaling pathway	GO:0009742	Biological Process	76%
Blast2go	protein autophosphorylation	GO:0046777	Biological Process	76%
Blast2go	protein kinase activity	GO:0004672	Molecular Function	76%
Blast2go	plasma membrane	GO:0005886	Cellular Component	76%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	76%
Blast2go	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	76%
Blast2go	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	76%
Blast2go	Serine/threonine-protein kinase, active site	IPR008271	-	76%
Blast2go	Protein kinase-like domain	IPR011009	-	76%
Blast2go	Protein kinase, ATP binding site	IPR017441	-	76%
Blast2go	Tyrosine-protein kinase, catalytic domain	IPR020635	-	76%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: B8LKY1

Fln msg: No stop codon before M and low homology subject, your sequence is longer than subject: 464 - 431

Fln protein: MKISNLAQSLDGPYPVDGNSPLDSKGKNGNMGPIIGSVVGASAALGLLAAGYCMFIRPKSKSKCSPPAWLPLPLHGGNSETMASKVSTGSHKSGTGSYVSSAPSSLGRFFTFAEIQEATNNFDENLILGVGGFGKVYKGELEDGTKVAVKRGNPRSEQGLTEFQTEIEMLSKLRHRHLVSLIGYCEERCEMILVYEYMANGPLRSHLYGSDLPSLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENLLAKVADFGLSKTGPTLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCARPAINPALPREQVNIAEWAMHWQKRGMLDQIIDRHLVGTINHGSLRKFGETAEKCLAEQGIDRPAMGDVLWNLEYALQLQETAMQNDPDENSTNRIEQLPLHFTQTETFDNSIVDKASERGSDQESEDATTSAVFSQLVNPQGR*

Protein Length: 465

Fln nts: CGAACGCTTCAGTTCTAGAGAAGCTGGTCCGGATCCAAGTTGGGCCGGCGAGTCCTCTATTTGATAATGCCGATGTTAATGCTATTCTCAACGGGTTGGAAATA_-_ATGAAGATAAGCAATCTTGCTCAAAGTCTGGACGGGCCTTATCCTGTTGATGGCAATAGTCCTTTGGACTCCAAAGGAAAAAATGGGAATATGGGACCTATTATTGGATCAGTTGTTGGAGCTTCTGCTGCACTGGGACTATTAGCAGCAGGGTATTGCATGTTTATCCGCCCGAAATCGAAGTCAAAGTGCTCCCCTCCAGCATGGTTGCCTCTGCCTTTGCACGGTGGGAATTCGGAAACTATGGCCAGCAAAGTTTCCACTGGTTCACACAAGAGTGGTACTGGTAGCTATGTTTCGTCTGCACCTTCGAGTCTGGGCCGGTTCTTTACATTTGCAGAGATACAAGAAGCCACCAACAACTTTGATGAAAATTTGATACTTGGCGTGGGAGGTTTCGGTAAGGTCTATAAAGGCGAACTGGAAGATGGGACCAAAGTTGCAGTTAAACGAGGCAATCCCAGATCAGAGCAAGGTCTCACGGAATTCCAAACAGAAATTGAGATGCTGTCTAAACTTCGACACCGCCATCTTGTTTCTCTGATTGGATACTGCGAGGAACGCTGTGAAATGATTCTGGTCTATGAATACATGGCCAATGGGCCTCTGAGGAGTCATTTGTATGGGTCAGATCTTCCATCTCTGTCCTGGAAACAGAGACTTGAAATATGTATAGGGGCGGCAAGAGGCCTCCATTACCTTCATACTGGGGCAGCACAGGGGATTATTCACCGTGATGTGAAGACAACAAATATTTTGCTGGACGAGAATCTTCTTGCTAAGGTGGCAGATTTTGGTCTGTCAAAAACTGGACCTACACTAGACCAGACACATGTGAGCACTGCAGTGAAAGGCAGTTTTGGATACCTTGATCCTGAGTATTTCCGAAGACAGCAACTCACTGAGAAGTCTGATGTTTATTCGTTTGGTGTGGTGCTCATGGAGGTTTTGTGTGCAAGGCCTGCAATAAATCCTGCTCTTCCAAGAGAGCAAGTCAACATTGCAGAGTGGGCAATGCACTGGCAGAAAAGAGGAATGCTTGACCAGATCATTGATCGTCATCTTGTGGGTACAATAAATCATGGCTCTTTGCGAAAGTTTGGGGAGACAGCAGAGAAGTGTTTGGCAGAGCAAGGTATTGATAGGCCTGCTATGGGGGATGTGCTCTGGAACTTGGAGTATGCCTTGCAACTTCAGGAGACTGCGATGCAAAATGATCCAGATGAGAATAGTACTAATCGCATTGAACAGCTTCCTCTTCACTTCACCCAAACAGAGACTTTTGATAACAGTATAGTTGATAAGGCTAGTGAAAGGGGAAGCGATCAAGAATCAGAAGATGCAACAACAAGTGCAGTTTTCTCGCAGTTGGTGAATCCTCAGGGAAGGTGAAGGCACAGAAAATTATTTCGAGGGCATGCTGAATGAAGTTTGTTTATTGCACTGTCTAAACCAGCCATTCAACCCTCAAAGATCTTGAATGT

Fln Alignment:

sp_v1.1_unigene35789___FTFAEIQEATNNFDENLILGVGGFGKVYKGELED----------GTKVAVKRGNPRSEQGLTEFQTEIEMLSKLRHRHLVSLIGYCEERCEMILVYEYMANGPLRSHLYGSDLPSLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENLLAKVADFGLSKTGPTLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCARPAINPALPREQVNIAEWAM-HWQKRGMLDQIIDRHLVGTINHGSLRKFGETAEKCLAEQGIDRPAMGDVLWNLEYALQLQETA
B8LKY1_______________FTFNELKSATRNFRPESVLGGGGFGYVFKGWIEENGTAAVKPGTGLTVAVKTLNPDGLQGHKEWLAEVNFLGQLRHANLVKLIGYCIEDNQRLLVYEYMPRGSLENHLFRKGALPLPWSTRMKIALGAAKGLEFLHGGAEKAVIYRDFKTSNILLDSEYNAKLSDFGLARDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKHRSNGEQNLVEWARPYLVDKRKLYRLVDPRLSGHYSIKGAQKVAQLAHYCLSRDPKARPTMNDVVEVLTPLLSLKDTA

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
1457	10	90			0.90298
1458	90	10			0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain