SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene35732

Length: 1028 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene35732 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Flavonol sulfotransferase-like n=2 Tax=Arabidopsis RepID=FSTL_ARATH	-	-	2.0e-38	39%
FL-Next	sp=Flavonol sulfotransferase-like; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	41%
Blast2go	flavonol 3-	-	-	3.37911e-38	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	defense response	GO:0006952	Biological Process	3.37911e-38	59%
Blast2go	brassinosteroid metabolic process	GO:0016131	Biological Process	3.37911e-38	59%
Blast2go	brassinosteroid sulfotransferase activity	GO:0080118	Molecular Function	3.37911e-38	59%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Sulfotransferase domain	IPR000863	-	3.37911e-38	59%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: sp_plants

Fln subject: P52839

Fln msg: your sequence is shorter than subject: 238 - 326

Fln protein: NPHVLVPTMETYLFNSSDSEQYDISCFSDFPSPRVLHTHLPIHTLPLLVRSSPNCNKIVYIARNPRDSFVSLWQFYSRLRGAGSHYLDGDLGKETVFDAFCSGFYYGGPFAENVLSYWHESRRNPNQVMFVTYEDLQADCVGWVKRMALFLGCSSPLLEDNAQIIAEKCSFDTLCNLQVNRKGKVGTLKYGMKNAFFFREGKVGEWKKHFTPQMEERIYLEIEQKLSDQGLRFTNSL*

Protein Length: 239

Fln nts: AAAATCCGCATGTTTTGGTCCCAACCATGGAAACTTATCTCTTCAATTCAAGTGACAGCGAACAGTATGATATTTCCTGCTTCTCTGATTTTCCGTCTCCGCGTGTGCTACACACACATTTGCCAATCCACACGTTGCCTCTTCTTGTGAGATCTTCTCCGAATTGCAACAAGATAGTTTACATTGCCCGCAACCCCAGAGATTCCTTCGTTTCCCTTTGGCAATTCTATTCCAGACTTCGTGGAGCGGGGTCTCATTATTTGGACGGAGATCTCGGCAAGGAAACGGTGTTTGATGCATTTTGCTCTGGCTTCTACTATGGCGGCCCCTTTGCAGAGAACGTTCTGAGTTACTGGCATGAAAGCAGGCGCAACCCGAATCAGGTGATGTTTGTGACGTACGAGGACCTGCAGGCCGATTGCGTGGGATGGGTTAAAAGAATGGCTCTTTTCTTGGGCTGCTCTTCTCCTCTTCTGGAAGACAACGCCCAGATAATTGCAGAAAAGTGTAGTTTCGATACCCTCTGCAATCTGCAGGTGAACAGAAAAGGAAAAGTGGGGACGCTTAAATACGGAATGAAAAACGCCTTCTTCTTCCGCGAGGGCAAAGTGGGCGAGTGGAAAAAGCATTTCACGCCACAGATGGAGGAGCGTATTTATTTAGAGATCGAGCAGAAATTGAGCGATCAAGGCCTTCGTTTCACTAATAGCTTGTAG___AAAGCCATTTCGTTTGTGTTGAATTTATATTAGCTAGATAGCTATCAGGTCCTCGGATTCTGAAATCTTCCTCAACTCAACAATTAAGATAAAGAAGTCACATCCATTTCCATCTACTTATTACTTATATTGACCATCAGTTGCAGTGAAATTCCCTAGTGCAATGAGTACATTGCCTTATGCATAGTTGATGTAGTTTCATGTTATTCTCGTAAAAGTTATAGTCACTTGCAGTGAAATTTCTTGGTGCAAGAGTACATTGCTGTGACCATAACTGATGTTGTTTGTGATTGTCATGTTTGAAATTAAAGA

Fln Alignment:

sp_v1.1_unigene35732___NPHVLVPTMETYLFNSSDSEQYDISCFSDFPSPRVXXXXXXXXXXXXLVRSSPNCNKIVYIARNPRDSFVSLWQFYSRLRGAGSHYLDGDLGKETVFDAFCSGFYYGGPFAENVLSYWHESRRNPNQVMFVTYEDLQADCVGWVKRMALFLGCSSPLLEDNAQIIAEKCSFDTLCNLQVNRKGKVGTLKYGMKNAFFFREGKVGEWKKHFTPQMEERIYLEIEQKLSDQGLRFTN
P52839_______________NPHLLVPFLEGVYYESPDFD------FSSLPSPRLMNTHISHLSLPESVKSS-SC-KIVYCCRNPKDMFVSLWHFGKKLAPEET----ADYPIEKAVEAFCEGKFIGGPFWDHILEYWYASRENPNKVLFVTYEELKKQTEVEMKRIAEFLECGF-IEEEEVREIVKLCSFESLSNLEVNKEGK---LPNGIETKTFFRKGEIGGWRDTLSESLAEEIDRTIEEKFKGSGLKFSS

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
864		33		66	0.997452
874	66		33		0.997452
956	87		12		0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain