SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene35553

Length: 987 nt

Origin of reads: Biogeco_2 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene35553 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9SBF9_RICCO	-	-	3.0e-13	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%
Blast2go	ap2 erf domain-containing transcription factor	-	-	1.7959e-33	58%

Source	InterPros	Term	Type	e value	Identity
Blast2go	AP2/ERF domain	IPR001471	-	1.7959e-33	58%

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
413	75			25	0.996473
438		50	25		0.995539
450		33		66	0.999989
457		33		66	0.99993
638		25	75		0.996473
642		60	40		1.0
670		40		60	1.0
703	60		40		1.0
720	25		75		0.996473
728		40		60	1.0
734		60		40	1.0
736		60		40	1.0
737		60		40	1.0
764		50		50	1.0
786			25	75	0.996473
795		60		40	1.0
796		60	40		1.0
800		60	40		1.0
801	40			60	1.0
803	40	60			1.0
804		60	40		1.0
808	50	50			1.0
809			50	50	1.0
810			50	50	1.0
813	40		60		1.0
815	60		40		1.0
817		20		40	1.0
853	33	33		33	0.997752
856	33			66	0.997453
857	33			66	0.997453
882		66		33	0.997464

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain