SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene35015

Length: 248 nt

UniGene Fasta

>sp_v1.1_unigene35015
CGTCGTGACCTTGGCTGTCACTCAGAAACGTTGGATTGGCCTACTCGTTATAAGATTGCTTTTGGTGCTGCTAAGGGAATGTCCTACCTGCATCATGGCTGTTCCCCTCCAATACTACACAGGGATGTTAAATCATATAATATATTGCTGGATTCTGAATTGGAGGCCCATATTGCTGATTTTGGTTTAGCTAGAATTGTAGAGAAGCTGGGTCAGAAGAACATAGTATCAGGGGTTGCTGGAACATA

Ace file of the UniGene sp_v1.1_unigene35015

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[RTKL] COG0515 Serine/threonine protein kinase	-	-	1.0e-07	52%
FL-Next	tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca).	-	-	0.0	55%
Blast2go	protein	-	-	4.04359e-23	78%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	4.04359e-23	78%
Blast2go	Serine/threonine-protein kinase, active site	IPR008271	-	4.04359e-23	78%
Blast2go	Protein kinase-like domain	IPR011009	-	4.04359e-23	78%
Blast2go	Serine/threonine-protein kinase-like domain	IPR017442	-	4.04359e-23	78%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q19AV8

Fln msg: Distance to subject end: 135 aas, your sequence is shorter than subject: 82 - 998

Fln protein: RRDLGCHSETLDWPTRYKIAFGAAKGMSYLHHGCSPPILHRDVKSYNILLDSELEAHIADFGLARIVEKLGQKNIVSGVAGT

Protein Length: 83

Fln nts: CGTCGTGACCTTGGCTGTCACTCAGAAACGTTGGATTGGCCTACTCGTTATAAGATTGCTTTTGGTGCTGCTAAGGGAATGTCCTACCTGCATCATGGCTGTTCCCCTCCAATACTACACAGGGATGTTAAATCATATAATATATTGCTGGATTCTGAATTGGAGGCCCATATTGCTGATTTTGGTTTAGCTAGAATTGTAGAGAAGCTGGGTCAGAAGAACATAGTATCAGGGGTTGCTGGAACATA

Fln Alignment:

sp_v1.1_unigene35015___GCHSETLDWPTRYKIAFGAAKGMSYLHHGCSPPILHRDVKSYNILLDSELEAHIADFGLARIVEKLGQ-KNIVSGVAGT
Q19AV8_______________GPKASVLDWPIRYKIALGAAQGLAYLHHGCVPAIVHRDVKSNNILLDEDYVAHVADFGVAKILQSCARGADSMSAIAGS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain