SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene34695

Length: 1353 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene34695

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450 n=1 Tax=Coptis japonica var. dissecta RepID=A9ZT56_COPJA	-	-	49%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	87%
Blast2go	cytochrome p450	-	-	70%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peroxidase.	EC:1.11.1.7	-	0.0	70%

Source	KEGGs	Term	Identity
Blast2go	Phenylalanine metabolism	00360	70%
Blast2go	Methane metabolism	00680	70%
Blast2go	Phenylpropanoid biosynthesis	00940	70%
Blast2go	Biosynthesis of phenylpropanoids	01061	70%
Blast2go	Metabolic pathways	01100	70%
Blast2go	Biosynthesis of secondary metabolites	01110	70%

Source	GOs	Term	Type	Identity
Blast2go	brassinosteroid homeostasis	GO:0010268	Biological Process	70%
Blast2go	brassinosteroid metabolic process	GO:0016131	Biological Process	70%
Blast2go	response to brassinosteroid stimulus	GO:0009741	Biological Process	70%
Blast2go	response to light stimulus	GO:0009416	Biological Process	70%
Blast2go	protein binding	GO:0005515	Molecular Function	70%
Blast2go	peroxidase activity	GO:0004601	Molecular Function	70%
Blast2go	steroid hydroxylase activity	GO:0008395	Molecular Function	70%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWW9

Fln msg: your sequence is shorter than subject: 398 - 517

Fln protein: FGHYGRISSNPLGRQLVGQGLVGLEGEKWVQHRRIINPAFHLDFLKGMVPTIVESTTNMLEEWSKLLLSGAEEVEVLKEFCNLTADVISRTAFGGSYAEAKNISNLQAQQMVLTAELFRSVYVPGFRFLPTRKNRQRWKLEKELRKCMRQVIEARERTANMEESGICGTDLLSLMISSRNKQLGDKLQDVCMTTEEIIDECKTFYFAGHETTSILLTWTMILLGMHQDWQERGRKEVLEVCGKNVPNADSVNHLKIVGMILHEALRLYPPASSLQRQACKPMKLGRLSIPAGTRLVLPILAIHHDQSLWGNDANEFNPARFSEGIAKAVKHPLAFMPFGFGPRVCVGQNFALLEAKVVLAMILQQFSFVTSPSYAHTPSAFLTTRPQHGAQVILHMN*

Protein Length: 399

Fln nts: GTTCGGCCACTATGGACGTATTTCTTCTAATCCCCTTGGAAGGCAGTTGGTGGGACAGGGCCTTGTGGGCTTGGAGGGTGAGAAATGGGTGCAGCACAGAAGAATCATCAATCCTGCTTTTCATCTGGATTTCTTGAAGGGCATGGTTCCAACAATTGTTGAAAGTACCACCAATATGTTGGAGGAATGGAGCAAATTGTTGTTGTCTGGTGCAGAAGAAGTTGAAGTGCTTAAGGAGTTCTGCAATCTGACAGCAGATGTTATTTCTCGCACAGCATTTGGTGGCAGTTATGCGGAGGCAAAGAACATTTCCAATTTGCAAGCCCAACAGATGGTTCTTACAGCTGAATTATTTCGCAGTGTTTATGTTCCAGGTTTCAGGTTTCTGCCTACAAGAAAGAACAGACAACGTTGGAAGTTGGAGAAAGAACTCAGGAAATGCATGAGGCAGGTAATTGAAGCTCGGGAAAGGACTGCTAACATGGAAGAGTCAGGAATCTGTGGTACTGATCTGCTTAGTCTAATGATCTCTTCCCGAAATAAACAGTTGGGGGACAAACTGCAAGATGTATGCATGACTACAGAAGAAATCATTGATGAATGCAAGACTTTCTACTTCGCAGGACATGAAACTACATCAATCCTGTTGACATGGACCATGATTTTACTGGGAATGCATCAAGACTGGCAGGAGCGTGGACGCAAAGAGGTTTTAGAAGTCTGTGGAAAAAATGTTCCAAATGCAGATAGTGTGAATCATCTTAAAATTGTGGGAATGATTCTACATGAGGCCCTGAGACTTTACCCACCAGCAAGCAGTTTACAACGTCAGGCATGCAAGCCAATGAAGCTTGGAAGGCTCTCAATTCCTGCAGGCACTCGTCTTGTCCTTCCAATCCTTGCAATCCACCATGATCAATCTTTGTGGGGAAATGATGCAAATGAGTTCAACCCAGCACGATTTAGTGAGGGAATTGCAAAGGCCGTGAAACATCCATTGGCATTTATGCCATTTGGATTTGGTCCAAGGGTATGTGTGGGACAGAACTTTGCTCTGTTGGAAGCAAAAGTAGTATTAGCCATGATTCTGCAACAATTTTCTTTTGTCACTTCGCCATCTTATGCTCATACACCTAGCGCGTTTCTCACCACGCGACCCCAACATGGAGCCCAGGTGATCCTCCACATGAACTAA___CCTCAAAATGGTGATTTTCCAAAAAATGCATGCACATATTGAATCTAGATTCTAAACCTTCACAGTTTAGGTTGTGCTATTGGATTATATTGTTCAACTTCTTACATATCATATGCAGGTCATAAGTGTGGCTAAATATTTTCTATGTTGCAAATGCC

Fln Alignment:

sp_v1.1_unigene34695___FGHYGRISSNPXXXXXXXXXXXXXXXXKWVQHRRIINPAFHLDFLKGMVPTIVESTTNMLEEWSKLLLSGAEEVEVLKEFCNLTADVISRTAFGGSYAEAKNISNLQAQQMVLTAELFRSVYVPGFRFLPTRKNRQRWKLEKELRKCMRQVIEARERTANMEESGICGTDLLSLMISSRNKQLGDKLQDVCMTTEEIIDECKTFYFAGHETTSILLTWTMILLGMHQDWQERGRKEVLEVCGKN-VPNADSVNHLKIVGMILHEALRLYPPASSLQRQACKPMKLGRLSIPAGTRLVLPILAIHHDQSLWGNDANEFNPARFSEGIAKAVKHPLAFMPFGFGPRVCVGQNFALLEAKVVLAMILQQFSFVTSPSYAHTPSAFLTTRPQHGAQVILHMN
A9NWW9_______________FGHYENISSNPLGRQLVGQGLVGLRGEKWVQHRRIINPAFHLDFLKGMVPTIVESTANMLEKWGKLVLSGAEEVEVLKEFCNLTADVISRTALGSSYAEAKHIFNLQDQQMLLTAELVLSVYVPGFRFLPTRKNRQRWKLEKEIRKCMRQVIEARERTADIEQSGSYGTDLLGLMMSAKNKRVGGKLQDVRMTTEEIIDECKTFYFAGHETTSILLTWTIILLGMHQDWQDRGRKEVLEVCGKNVVPDADSVNHLKIVGMILNEALRLYPPAVFLQRQAVKPMQLGRLSIPAGTQLLLPILAIHHDQCLWGNDANEFNPARFSEGIAKAVKHPLAFMPFGFGPRICVGQNFALLEAKVVLAMILQRFSFVTSPSYAHAPVMVVTVRPQHGAQVILHMN

SNPs (tot: 3)

Position	C %	G %	T %	Probability
776		28	71	1.0
813	85		14	0.993533
869	16		83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain