SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene34694

Length: 578 nt

Origin of reads: Biogeco_2 Uma

UniGene Fasta

>sp_v1.1_unigene34694
GATCCTCTGGTGGAAGCCTCTGCAGATCCAGAAACATTTTGAATCTCAAGGGATCAGTGGCCCTCCTTGCAGGCTTTTATATGGTAACATGCTTGATATGCTTAAGATGAGAGAACAGGCAATTTCCAGGCCAATGGAGTTATCACATGATATTATTCCCCGGGCTCTTTCGTTTTATAGCCGTTGGACTGAGGCCTATGGTAACACATTTATCCACTGGTTCGGCTCGACTGCTAGGCTGAACATTACAGACCCCGACCTGATATGGGAAGTCTTGTGCAACAAATCTGGTCTCTACAAAAAAAGCGTTCAGATGAAACAACTGAATGGAGAAGGCCTTCTTAGTCTGGAAGGAGAGATGTGGGCTCAGCACAGAAGAATCATTAATCCAGCATTCCACGTTGAGCATTTGAAGGGCATGGTTCCAATGGTTATTGGAAGCACATCGGCTATGCTGGACAAATGGAAAGAGAGAATTGAATTGGGTGAGAATGAGATAGAGGTCTGCAAAGAGTTCCAGAATCTAACAGAAGATATATTGGCACACACTGTGTTTGGAAGCAGCTATTCTGAAGGAA

Ace file of the UniGene sp_v1.1_unigene34694

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9SEM0_RICCO	-	-	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	54%
Blast2go	cytochrome p450	-	-	66%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peroxidase.	EC:1.11.1.7	-	0.0	66%

Source	KEGGs	Term	Identity
Blast2go	Phenylalanine metabolism	00360	66%
Blast2go	Methane metabolism	00680	66%
Blast2go	Phenylpropanoid biosynthesis	00940	66%
Blast2go	Biosynthesis of phenylpropanoids	01061	66%
Blast2go	Metabolic pathways	01100	66%
Blast2go	Biosynthesis of secondary metabolites	01110	66%

Source	GOs	Term	Type	Identity
Blast2go	brassinosteroid homeostasis	GO:0010268	Biological Process	66%
Blast2go	brassinosteroid metabolic process	GO:0016131	Biological Process	66%
Blast2go	response to brassinosteroid stimulus	GO:0009741	Biological Process	66%
Blast2go	response to light stimulus	GO:0009416	Biological Process	66%
Blast2go	protein binding	GO:0005515	Molecular Function	66%
Blast2go	peroxidase activity	GO:0004601	Molecular Function	66%
Blast2go	steroid hydroxylase activity	GO:0008395	Molecular Function	66%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cytochrome P450	IPR001128	-	0.0	66%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: A9NWW9

Fln msg: Distance to subject end: 298 aas, your sequence is shorter than subject: 192 - 517

Fln protein: ILWWKPLQIQKHFESQGISGPPCRLLYGNMLDMLKMREQAISRPMELSHDIIPRALSFYSRWTEAYGNTFIHWFGSTARLNITDPDLIWEVLCNKSGLYKKSVQMKQLNGEGLLSLEGEMWAQHRRIINPAFHVEHLKGMVPMVIGSTSAMLDKWKERIELGENEIEVCKEFQNLTEDILAHTVFGSSYSEG

Protein Length: 193

Fln nts: GATCCTCTGGTGGAAGCCTCTGCAGATCCAGAAACATTTTGAATCTCAAGGGATCAGTGGCCCTCCTTGCAGGCTTTTATATGGTAACATGCTTGATATGCTTAAGATGAGAGAACAGGCAATTTCCAGGCCAATGGAGTTATCACATGATATTATTCCCCGGGCTCTTTCGTTTTATAGCCGTTGGACTGAGGCCTATGGTAACACATTTATCCACTGGTTCGGCTCGACTGCTAGGCTGAACATTACAGACCCCGACCTGATATGGGAAGTCTTGTGCAACAAATCTGGTCTCTACAAAAAAAGCGTTCAGATGAAACAACTGAATGGAGAAGGCCTTCTTAGTCTGGAAGGAGAGATGTGGGCTCAGCACAGAAGAATCATTAATCCAGCATTCCACGTTGAGCATTTGAAGGGCATGGTTCCAATGGTTATTGGAAGCACATCGGCTATGCTGGACAAATGGAAAGAGAGAATTGAATTGGGTGAGAATGAGATAGAGGTCTGCAAAGAGTTCCAGAATCTAACAGAAGATATATTGGCACACACTGTGTTTGGAAGCAGCTATTCTGAAGGAA

Fln Alignment:

sp_v1.1_unigene34694___ILWWKPLQIQKHFESQGISGPPCRLLYGNMLDMLKMREQAISRPMELSHDIIPRALSFYSRWTEAYGNTFIHWFGSTARLNITDPDLIWEVLCNKSGLYK---KSVQMKQLNXXXXXXXXXXMWAQHRRIINPAFHVEHLKGMVPMVIGSTSAMLDKWKERIELGENEIEVCKEFQNLTEDILAHTVFGSSYSE
A9NWW9_______________VIWWKPLQVKKCFESQGVRGPPYRLLNGNFADMVRMNTQAKSTPIPWSHDIVPRVLPYYHHWTKTYGKDFIYWVGSKPRLNVPHPELIKEILSNKFGHYENISSNPLGRQLVGQGLVGLRGEKWVQHRRIINPAFHLDFLKGMVPTIVESTANMLEKWGKLVLSGAEEVEVLKEFCNLTADVISRTALGSSYAE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain