SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene34676

Length: 712 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene34676

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily	-	-	4.0e-32	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	drug metabolite transporter superfamily	-	-	0.0	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast	GO:0009507	Cellular Component	0.0	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Drug/metabolite transporter	IPR000620	-	0.0	71%

Full-Lengther Next Prediction

SNPs (tot: 11)

Position	A %	C %	G %	T %	Probability
130		66		33	0.997452
315	33			66	0.997452
372	80	20			0.995493
376		80	20		0.995493
383	80			20	0.995493
384	80			20	0.995493
386	80		20		0.995493
389			80	20	0.995493
396		20		80	0.995493
397	20			80	0.995493
612	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain