SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene34577

Length: 830 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene34577

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	pentatricopeptide (PPR) repeat-containing protein	-	-	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	86%
Blast2go	pentatricopeptide repeat-containing protein	-	-	78%

Full-Lengther Next Prediction

SNPs (tot: 37)

Position	A %	C %	G %	T %	Probability
114			33	66	0.997454
116	66		33		0.997454
198	75	25			0.996479
199			25	75	0.996479
201		25	75		0.996479
202		75	25		0.996479
204		75	25		0.996479
205	25		75		0.996479
208		75		25	0.996483
209	66			33	0.997452
211	66		33		0.997452
212		33		66	0.997452
214	66		33		0.997452
215	66			33	0.997452
216	66	33			0.997452
217	33		66		0.997452
220		33	66		0.997452
221	33	66			0.997452
223			66	33	0.997452
341		66		33	0.997452
472	80		20		0.995498
606	66		33		1.0
609	66		33		1.0
610	66			33	1.0
611		66	33		1.0
614		33	66		1.0
615		66		33	1.0
617	60		40		1.0
619		40		60	1.0
624		33		66	1.0
625	40		60		1.0
626		40	60		1.0
627			60	40	1.0
628		40		60	1.0
629	40			60	1.0
700	80		20		0.995493
824		20		80	0.995495

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain