SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene33964

Length: 630 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene33964

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9R6R0_RICCO	-	-	70%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	29%
Blast2go	multidrug resistance	-	-	82%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to nematode	GO:0009624	Biological Process	0.0	82%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Multi antimicrobial extrusion protein	IPR002528	-	0.0	82%

Full-Lengther Next Prediction

SNPs (tot: 13)

Position	A %	C %	G %	T %	Probability
15		66	33		0.997461
16	33			66	0.997461
17	33		66		0.997461
103		33	66		0.997452
105			66	33	0.997452
107	33		66		0.997452
111	66			33	0.997452
112	66		33		0.997452
113		66	33		0.997452
114	66	33			0.997452
115			66	33	0.997452
117		66		33	0.997452
121	66			33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain