SustainPineDB

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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene33522

Length: 384 nt

Origin of reads: Uagpf

UniGene Fasta

>sp_v1.1_unigene33522
CGTCGTGACCTTGGCTGTCACTCATTCTATACGAGTAATTTTCTGAACACGGTAGGCAAAGGAGGTGCGATATACAAGCCACACTCTGCCTTTTGCTTCGAGTCTCAGGCATTTCGTCGTGCCTTGGCTGTCCCTAATTTCCCTTCTGTAATTGTTAACCCTGGCCAGATCTACAGGCACACCATGCTCATCAAGTTCTCTGTTGACAAGTAATTACCAATATAGAGTTTCAGTGCAATGGACCATCTATCACCGATATAGTTTTCGGGTTCTCTGGGCAGTTGTTAGTTTCATGCTGGCTTAATCTTGCTTTCAGCCATCCATAGATTGTTTTGTTATTGGACTTTAATCAAGCTCCATGAGTTATGAGGTAGTTTTAAACTT

Ace file of the UniGene sp_v1.1_unigene33522

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Aldose-1-epimerase, putative n=1 Tax=Ricinus communis RepID=B9SWV6_RICCO	-	-	1.0e-14	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Blast2go	aldose-1-	-	-	7.94272e-19	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Aldose 1-/Glucose-6-phosphate 1-epimerase	IPR008183	-	7.94272e-19	75%
Blast2go	Glycoside hydrolase-type carbohydrate-binding	IPR011013	-	7.94272e-19	75%
Blast2go	Glycoside hydrolase-type carbohydrate-binding, subgroup	IPR014718	-	7.94272e-19	75%
Blast2go	Aldose 1-epimerase	IPR015443	-	7.94272e-19	75%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AEE6

Fln msg: your sequence is shorter than subject: 71 - 398

Fln protein: RRDLGCHSFYTSNFLNTVGKGGAIYKPHSAFCFESQAFRRALAVPNFPSVIVNPGQIYRHTMLIKFSVDK*

Protein Length: 72

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTCTATACGAGTAATTTTCTGAACACGGTAGGCAAAGGAGGTGCGATATACAAGCCACACTCTGCCTTTTGCTTCGAGTCTCAGGCATTTCGTCGTGCCTTGGCTGTCCCTAATTTCCCTTCTGTAATTGTTAACCCTGGCCAGATCTACAGGCACACCATGCTCATCAAGTTCTCTGTTGACAAGTAA___TTACCAATATAGAGTTTCAGTGCAATGGACCATCTATCACCGATATAGTTTTCGGGTTCTCTGGGCAGTTGTTAGTTTCATGCTGGCTTAATCTTGCTTTCAGCCATCCATAGATTGTTTTGTTATTGGACTTTAATCAAGCTCCATGAGTTATGAGGTAGTTTTAAACTT

Fln Alignment:

sp_v1.1_unigene33522___FYTSNFL-NTVGKGGAIYKPHSAFCFESQAFRRALAVPNFPSVIVNPGQIYRHTMLIKFSVDK
D5AEE6_______________FYTSNNLKDTVGKGGVIYKAHSAFCFESQAFPNAVNQPKFPSVIVKPGQIYKHTMLFKFSVEK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain