SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene33450

Length: 469 nt

UniGene Fasta

>sp_v1.1_unigene33450
TAATAATCCACAGAGTGTAGGGAATCAGCGGCCGGCTCTCCTTCTAATTCACGGTTTTGGGACAGATGGCCTGATGGCATGGGACACCCAAATCGTGGCTCTGGGAAAGGACTTCGACCTCCTAATCCCCGACCTCATATTCTTCGGGGATTCTACCACGRCGAGCACTGAACGCAGCGAGATTTTTCAAGCCGAGTGCCTCAACTGTATGCTYCATTRTCTGGGAGTGGAGAGCGTGATCGTGGTTGGGCATAGCTATGGTGGCTTCGTGGCCTTCTGGATGGCACACAAATACCCTAACGTTGTCCGCCGCCTGGTGATCGTCAGCTCYGCAATTTGCATGACGCCGTCGACCAATGATCCTCTTCTCGAAGAATTGGGCTCATCAGACATTAAAGAAGTCCTCCTTCCCAACAATGCTGGAGATTTGAGAAAATCAATGAACGTTACTTTCCACAGAATGCCCTGG

Ace file of the UniGene sp_v1.1_unigene33450

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	catalytic/ hydrolase	-	-	5.0e-32	44%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	protein	-	-	0.0	69%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	69%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LNP3

Fln msg: Distance to subject end: 103 aas, your sequence is shorter than subject: 156 - 305

Fln protein: NNPQSVGNQRPALLLIHGFGTDGLMAWDTQIVALGKDFDLLIPDLIFFGDSTTASTERSEIFQAECLNCMLHYLGVESVIVVGHSYGGFVAFWMAHKYPNVVRRLVIVSSAICMTPSTNDPLLEELGSSDIKEVLLPNNAGDLRKSMNVTFHRMPW

Protein Length: 157

Fln nts: TAATAATCCACAGAGTGTAGGGAATCAGCGGCCGGCTCTCCTTCTAATTCACGGTTTTGGGACAGATGGCCTGATGGCATGGGACACCCAAATCGTGGCTCTGGGAAAGGACTTCGACCTCCTAATCCCCGACCTCATATTCTTCGGGGATTCTACCACGgCGAGCACTGAACGCAGCGAGATTTTTCAAGCCGAGTGCCTCAACTGTATGCTtCATTaTCTGGGAGTGGAGAGCGTGATCGTGGTTGGGCATAGCTATGGTGGCTTCGTGGCCTTCTGGATGGCACACAAATACCCTAACGTTGTCCGCCGCCTGGTGATCGTCAGCTCcGCAATTTGCATGACGCCGTCGACCAATGATCCTCTTCTCGAAGAATTGGGCTCATCAGACATTAAAGAAGTCCTCCTTCCCAACAATGCTGGAGATTTGAGAAAATCAATGAACGTTACTTTCCACAGAATGCCCTGG

Fln Alignment:

sp_v1.1_unigene33450___NNPQSVGNQRPALLLIHGFGTDGLMAWDTQIVALGKDFDLLIPDLIFFGDSTTASTERSEIFQAECLNCMLHYLGVESVIVVGHSYGGFVAFWMAHKYPNVVRRLVIVSSAICMTPSTNDPLLEELGSSDIKEVLLPNNAGDLRKSMNVTFHRMPW
B8LNP3_______________NNPHSVGNQRPALLLIHGFGADGLMAWDTQICALGKDFDLLIPDLIFFGNSTTTSTERSEIFQAECLRSMLHCLGVESVIVVGHSYGGFVAFWMAHKYPSVVRRLVIVSSAICMTPSTNDSLLQELGSSDIKDVILPNNAADFRKSMNVTFHRMPW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain