SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene33290

Length: 1086 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene33290

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	COMT; catechol-O-methyltransferase (EC:2.1.1.6); K00545 catechol O-methyltransferase [EC:2.1.1.6]	-	-	9.99995e-41	41%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	cathechol o-methyltransferase	-	-	0.0	73%

Source	ECs	Term	Type	e value	Identity
AutoFact	Catechol O-methyltransferase.	EC:2.1.1.6	-	9.99995e-41	41%

Source	KEGGs	Term	e value	Identity
AutoFact	Steroid hormone biosynthesis	00140	9.99995e-41	41%
AutoFact	Tyrosine metabolism	00350	9.99995e-41	41%
AutoFact	Betalain biosynthesis	00965	9.99995e-41	41%
AutoFact	Metabolic pathways	01100	9.99995e-41	41%

Source	InterPros	Term	Type	e value	Identity
Blast2go	O-methyltransferase, family 3	IPR002935	-	0.0	73%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NQ07

Fln msg: your sequence is shorter than subject: 224 - 244

Fln protein: MGGDGREKALLDHVLQTAERGNPQSVLQAIDSYGRRTSWLMNIGDDKGPFLDSALAKYNPRVALEIGTYCGYSAVRIASQMQRPKSMLLAVEMSPLNCQIATQIIDHAGLSSKVRVVEGKFDERLDAVKQFLEEMEANFFDFVLLDHWKDRYMPDYLLLKENGMMKKGSGIFSDNMGPILGPADFKKYIKTHPDELETQEFKSNAEYMRWMPDSVCISTYKLD*

Protein Length: 225

Fln nts: ACATGGGAGGGGACGGGCGAGAGAAAGCGTTGCTCGACCATGTCCTGCAGACGGCAGAGAGGGGCAACCCTCAGTCTGTTTTGCAGGCCATCGACTCCTATGGCAGGCGCACCAGCTGGCTCATGAACATTGGCGACGATAAGGGCCCCTTTCTCGATTCCGCCCTTGCAAAGTACAATCCTAGGGTTGCCCTCGAGATTGGGACGTACTGCGGTTACTCTGCTGTCAGGATCGCGTCGCAGATGCAGAGGCCGAAGAGTATGCTGCTGGCGGTGGAGATGAGCCCCCTCAATTGCCAAATCGCCACACAAATCATCGACCATGCAGGGCTATCATCCAAGGTGCGAGTAGTGGAAGGAAAATTCGACGAGAGACTGGACGCTGTTAAGCAATTTCTGGAAGAGATGGAGGCTAACTTCTTCGATTTCGTCCTCCTGGATCACTGGAAGGACCGCTATATGCCAGATTATCTGCTGCTGAAAGAGAATGGCATGATGAAGAAGGGAAGTGGGATATTTTCAGATAACATGGGTCCTATCCTTGGACCAGCAGACTTCAAGAAATATATCAAGACGCATCCGGACGAGCTTGAGACACAGGAATTTAAGAGCAATGCTGAATACATGCGCTGGATGCCTGACAGTGTCTGTATATCTACTTATAAATTAGACTAG___CTTGGCCGTACTGTTTTATCTTTTCCAACTGAAGAAATGGCGCCTGGAACAGTTCTCAGACCTACATAATACTACTGCCCTATTTACATTTACTGGTTACAGAGCTCGCTTGGTAGCTTCAAGTGGCTTTAAGTTATAAAGTGTCTATAAATAATGAATAACAGAAGGAAATGTGACCCCAAATACAAGCTCCGTCTTCTGACAGTATTTTGCAGGGAAGCTTATCCTGTTTAATGGTGTATTTATCAACAAATGATTAACAGAAGGATTTTGTGATGAGGTCATCCTCTTTATGCGTTAAGGCCAAGCAGAGTCGGTACCAGCGCATGTGAATCAAATGCCTTTCCTTGGATTGGAAGCTTTTATGGATTCAATAAAGGAGTTTGCCGCGCACTATTATGTTCACGGCACG

Fln Alignment:

sp_v1.1_unigene33290___GDGREKALLDHVLQTAERGNPQSVLQAIDSYGRRTSWLMNIGDDKGPFLDSALAKYNPRVALEIGTYCGYSAVRIASQMQRPKSMLLAVEMSPLNCQIATQIIDHAGLSSKVRVVEGKFDERLDAVKQFLEEMEANFFDFVLLDHWKDRYMPDYLLLKENGMMKKGSGIFSDNMGPILGPADFKKYIKTHPDELETQEFKSNAEYMRWMPDSVCISTYKLD
A9NQ07_______________GDGREKALLDHVLQTAEKGNPQSVLEAIDSYSRRTSWLMNIGDDKGPFLDSALGKYNPRVALEIGTYCGYSAVRIASKMQKSGSKLLAVEMSPLNCQIATQIIDHAGLSSKVRVVEGKFDERLDAVKQFLEEMDAPFFDFVFLDHWKDRYMPDYLLLKENGMIRKGSGIFADNMGPVLGPADFKKYIKTHPEELETEEFKSNAEYMRWMPDSVCVSTYNLD

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
883		28		71	1.0
938	85		14		0.993533
964			85	14	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain